Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2276

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,641,003	+		Psyr_2274	0.76	+1.4
2,641,091	+		Psyr_2274	0.86	+3.0
2,641,091	+		Psyr_2274	0.86	+3.4
2,641,092	-		Psyr_2274	0.86	-1.3
2,641,092	-		Psyr_2274	0.86	+3.5
2,641,092	-		Psyr_2274	0.86	-2.9
2,641,092	-		Psyr_2274	0.86	-1.9
2,641,092	-		Psyr_2274	0.86	+2.1
2,641,181	+				-0.8
2,641,181	+				-0.5
2,641,181	+				-1.1
2,641,181	+				+3.3
2,641,181	+				-2.2
2,641,181	+				+3.1
2,641,181	+				+3.1
2,641,181	+				-0.3
2,641,182	-				+3.0
2,641,182	-				-2.1
2,641,182	-				-2.7
2,641,182	-				-0.8
2,641,182	-				-1.5
2,641,397	-		Psyr_2275	0.26	+3.0
2,641,397	-		Psyr_2275	0.26	-1.6
2,641,699	+		Psyr_2275	0.70	-2.7
2,641,700	-		Psyr_2275	0.70	-1.5
2,641,714	+		Psyr_2275	0.72	+0.3
2,641,715	-		Psyr_2275	0.73	+1.4
2,641,868	-				+3.5
2,641,914	+				+3.0
2,641,930	-				-1.5
2,642,023	+				-0.1
2,642,023	+				-1.4
2,642,023	+				-0.8
2,642,024	-				+2.4
2,642,179	+		Psyr_2276	0.19	+4.1
2,642,341	+		Psyr_2276	0.32	+2.1
2,642,347	+		Psyr_2276	0.32	-2.2
2,642,347	+		Psyr_2276	0.32	+3.0
2,642,490	+		Psyr_2276	0.43	+2.6
2,642,490	+		Psyr_2276	0.43	-1.5
2,642,490	+		Psyr_2276	0.43	-1.7
2,642,490	+		Psyr_2276	0.43	-1.8
2,642,490	+		Psyr_2276	0.43	-0.3
2,642,611	+		Psyr_2276	0.52	-1.2
2,642,611	+		Psyr_2276	0.52	-1.7
2,642,611	+		Psyr_2276	0.52	-1.4
2,642,641	+		Psyr_2276	0.54	-3.7
2,642,641	+		Psyr_2276	0.54	+4.0
2,642,641	+		Psyr_2276	0.54	+2.4
2,642,642	-		Psyr_2276	0.54	-3.0
2,642,980	+		Psyr_2276	0.79	+2.4
2,642,981	-		Psyr_2276	0.79	+0.5
2,643,085	+		Psyr_2276	0.87	-0.2
2,643,086	-		Psyr_2276	0.87	-1.5
2,643,086	-		Psyr_2276	0.87	-0.2
2,643,086	-		Psyr_2276	0.87	+1.8
2,643,086	-		Psyr_2276	0.87	+0.8
2,643,562	+				-1.5
2,643,562	+				-5.5
2,643,563	-				+2.6
2,643,569	-				+0.9
2,643,686	-				+3.0
2,643,710	-				-1.0
2,643,933	+		Psyr_2277	0.20	+2.4
2,643,933	+		Psyr_2277	0.20	-1.1
2,643,933	+		Psyr_2277	0.20	+1.1
2,643,934	-				-4.1
2,643,934	-		Psyr_2277	0.20	+2.1
2,643,934	-		Psyr_2277	0.20	-1.8
2,643,940	-		Psyr_2277	0.20	-2.1
2,644,194	+		Psyr_2277	0.39	+3.4
2,644,195	-		Psyr_2277	0.39	+1.4
2,644,195	-		Psyr_2277	0.39	+1.8
2,644,195	-		Psyr_2277	0.39	-1.4