Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2260

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,623,267	+		Psyr_2258	0.87	-1.5
2,623,378	+				+3.7
2,623,552	+		Psyr_2259	0.29	+1.9
2,623,846	+		Psyr_2259	0.69	+2.7
2,623,998	+		Psyr_2259	0.89	+3.5
2,623,999	-		Psyr_2259	0.89	-0.7
2,624,048	+				-0.4
2,624,048	+				+2.5
2,624,048	+				-2.2
2,624,048	+				-0.6
2,624,049	-				-1.4
2,624,067	+				-3.9
2,624,068	-				+0.4
2,624,402	+		Psyr_2260	0.20	+0.9
2,624,402	+		Psyr_2260	0.20	-1.8
2,624,402	+		Psyr_2260	0.20	+2.7
2,624,403	-		Psyr_2260	0.20	-2.7
2,624,403	-		Psyr_2260	0.20	-1.5
2,624,403	-		Psyr_2260	0.20	-3.2
2,624,403	-				-0.1
2,624,472	+		Psyr_2260	0.25	+2.2
2,624,495	+		Psyr_2260	0.26	+2.2
2,624,495	+		Psyr_2260	0.26	-1.4
2,624,880	+		Psyr_2260	0.52	-1.5
2,624,880	+		Psyr_2260	0.52	+2.7
2,624,881	-		Psyr_2260	0.52	-2.2
2,624,882	+		Psyr_2260	0.52	+2.5
2,624,882	+		Psyr_2260	0.52	-1.9
2,624,882	+		Psyr_2260	0.52	-0.1
2,624,882	+		Psyr_2260	0.52	-3.6
2,624,883	-		Psyr_2260	0.52	+3.7
2,624,883	-		Psyr_2260	0.52	+0.9
2,624,965	+		Psyr_2260	0.57	+1.9
2,625,253	+		Psyr_2260	0.76	+2.9
2,625,333	-		Psyr_2260	0.81	+2.5
2,625,333	-		Psyr_2260	0.81	+3.6
2,625,636	+				+2.2
2,625,637	-				-2.2
2,625,637	-				+3.7
2,625,637	-				+3.2
2,625,640	+				-1.1
2,625,640	+				-0.0
2,625,640	+				+2.7
2,625,640	+				+3.2
2,625,640	+				-3.1
2,625,640	+				+3.0
2,625,641	-				+3.9
2,625,641	-				+2.7
2,625,659	+				-0.4
2,625,659	+				-0.4
2,625,954	+		Psyr_2261	0.19	+3.6
2,625,955	-		Psyr_2261	0.19	+1.9
2,625,955	-		Psyr_2261	0.19	-0.7
2,625,958	+		Psyr_2261	0.19	+2.2
2,625,958	+		Psyr_2261	0.19	+3.3
2,625,959	-		Psyr_2261	0.20	+1.3
2,625,959	-		Psyr_2261	0.20	+0.7
2,626,076	+		Psyr_2261	0.30	-1.1
2,626,145	-		Psyr_2261	0.36	+2.7
2,626,226	+		Psyr_2261	0.43	-1.7
2,626,227	-		Psyr_2261	0.43	+3.3
2,626,401	+		Psyr_2261	0.58	-0.4
2,626,455	+		Psyr_2261	0.63	-1.0
2,626,456	-		Psyr_2261	0.63	-0.4