Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2259

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,622,543	+				+0.9
2,622,676	+				+1.9
2,622,677	-				+2.2
2,622,677	-				+1.9
2,622,677	-				-2.3
2,622,677	-				+3.7
2,622,677	-				+1.9
2,622,677	-				+3.0
2,622,791	+				+1.9
2,622,791	+				+3.8
2,622,791	+				-0.0
2,622,792	-				-3.5
2,622,792	-				-4.4
2,623,267	+		Psyr_2258	0.87	-1.5
2,623,378	+				+3.7
2,623,552	+		Psyr_2259	0.29	+1.9
2,623,846	+		Psyr_2259	0.69	+2.7
2,623,998	+		Psyr_2259	0.89	+3.5
2,623,999	-		Psyr_2259	0.89	-0.7
2,624,048	+				-0.4
2,624,048	+				+2.5
2,624,048	+				-2.2
2,624,048	+				-0.6
2,624,049	-				-1.4
2,624,067	+				-3.9
2,624,068	-				+0.4
2,624,402	+		Psyr_2260	0.20	+0.9
2,624,402	+		Psyr_2260	0.20	-1.8
2,624,402	+		Psyr_2260	0.20	+2.7
2,624,403	-		Psyr_2260	0.20	-2.7
2,624,403	-		Psyr_2260	0.20	-1.5
2,624,403	-		Psyr_2260	0.20	-3.2
2,624,403	-				-0.1
2,624,472	+		Psyr_2260	0.25	+2.2
2,624,495	+		Psyr_2260	0.26	+2.2
2,624,495	+		Psyr_2260	0.26	-1.4
2,624,880	+		Psyr_2260	0.52	-1.5
2,624,880	+		Psyr_2260	0.52	+2.7
2,624,881	-		Psyr_2260	0.52	-2.2
2,624,882	+		Psyr_2260	0.52	+2.5
2,624,882	+		Psyr_2260	0.52	-1.9
2,624,882	+		Psyr_2260	0.52	-0.1
2,624,882	+		Psyr_2260	0.52	-3.6
2,624,883	-		Psyr_2260	0.52	+3.7
2,624,883	-		Psyr_2260	0.52	+0.9
2,624,965	+		Psyr_2260	0.57	+1.9