Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2239

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,601,518	+				-0.1
2,601,532	+		Psyr_2238	0.10	+1.9
2,601,532	+		Psyr_2238	0.10	-0.3
2,601,532	+		Psyr_2238	0.10	+2.5
2,601,533	-		Psyr_2238	0.11	+1.9
2,601,533	-		Psyr_2238	0.11	-2.4
2,601,533	-		Psyr_2238	0.11	-2.1
2,601,533	-		Psyr_2238	0.11	+1.9
2,601,535	-		Psyr_2238	0.11	-2.1
2,601,582	-		Psyr_2238	0.16	+2.2
2,601,874	+		Psyr_2238	0.48	-0.4
2,601,874	+		Psyr_2238	0.48	+3.6
2,601,874	+		Psyr_2238	0.48	-1.4
2,601,874	+		Psyr_2238	0.48	+3.2
2,601,875	-		Psyr_2238	0.48	-2.9
2,601,875	-		Psyr_2238	0.48	-0.5
2,601,875	-		Psyr_2238	0.48	+0.9
2,602,326	+				-2.3
2,602,327	-				+3.0
2,602,662	+		Psyr_2239	0.22	-1.1
2,602,662	+		Psyr_2239	0.22	-3.6
2,602,662	+		Psyr_2239	0.22	-1.0
2,602,662	+		Psyr_2239	0.22	-2.0
2,602,662	+		Psyr_2239	0.22	+3.6
2,602,662	+		Psyr_2239	0.22	+0.9
2,602,663	-		Psyr_2239	0.22	+2.7
2,602,663	-				+0.9
2,602,824	+		Psyr_2239	0.39	-0.6
2,602,824	+		Psyr_2239	0.39	-0.9
2,602,825	-		Psyr_2239	0.39	+1.5
2,602,825	-		Psyr_2239	0.39	-4.3
2,602,825	-		Psyr_2239	0.39	-1.3
2,602,933	+		Psyr_2239	0.51	-0.7
2,602,984	-		Psyr_2239	0.56	+0.9
2,602,984	-		Psyr_2239	0.56	-1.2
2,602,984	-		Psyr_2239	0.56	+2.9
2,602,984	-		Psyr_2239	0.56	+3.0
2,603,060	+		Psyr_2239	0.64	-0.1
2,603,061	-		Psyr_2239	0.64	+3.9
2,603,061	-		Psyr_2239	0.64	-1.5
2,603,094	+		Psyr_2239	0.68	+3.7
2,603,095	-		Psyr_2239	0.68	+0.5
2,603,143	-				+2.2
2,603,143	-		Psyr_2239	0.73	-1.4
2,603,431	+				-0.1
2,603,431	+				-0.1
2,603,432	-				+2.5
2,603,442	-				+0.6
2,603,514	+				+1.2
2,603,514	+				-0.4
2,603,515	-				+2.9
2,603,520	+				+3.2
2,603,520	+				+2.9
2,603,521	-				+3.2
2,603,521	-				+0.8
2,603,521	-				-0.8
2,603,521	-				+0.3
2,603,521	-				-1.7
2,603,521	-				+2.7
2,603,524	+				+2.7
2,603,525	-				+0.9
2,603,555	+				+2.2
2,603,617	+				+3.0
2,603,618	-				-2.5
2,603,618	-				-0.8
2,603,635	+				-2.2
2,603,648	-				+0.9
2,603,679	+				+1.4
2,603,680	-				+1.5
2,603,680	-				-3.6
2,603,967	+		Psyr_2240	0.22	+3.5
2,603,967	+		Psyr_2240	0.22	+2.2
2,603,967	+		Psyr_2240	0.22	+1.5
2,603,967	+		Psyr_2240	0.22	+0.1
2,603,968	-		Psyr_2240	0.23	-0.9
2,603,968	-		Psyr_2240	0.23	+2.9
2,603,968	-		Psyr_2240	0.23	-1.3
2,603,968	-		Psyr_2240	0.23	+3.6
2,603,969	+		Psyr_2240	0.23	-2.5
2,603,969	+		Psyr_2240	0.23	+3.0
2,603,969	+		Psyr_2240	0.23	-1.5
2,603,970	-		Psyr_2240	0.23	+1.9
2,604,185	+		Psyr_2240	0.36	+0.7
2,604,186	-		Psyr_2240	0.36	+0.2