Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2232

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,594,179	+				-2.2
2,594,179	+				+2.2
2,594,180	-				+3.3
2,594,246	-				-0.1
2,594,246	-				-2.9
2,594,249	+				-0.1
2,594,249	+				+3.8
2,594,249	+				+2.9
2,594,250	-				-3.8
2,594,250	-				-2.8
2,594,276	+				-2.0
2,594,654	+		Psyr_2231	0.45	+3.0
2,594,655	-		Psyr_2231	0.45	-0.1
2,594,705	+		Psyr_2231	0.52	+2.9
2,594,706	-		Psyr_2231	0.52	-0.8
2,594,804	+		Psyr_2231	0.65	-0.2
2,594,843	+		Psyr_2231	0.70	+1.5
2,594,843	+		Psyr_2231	0.70	+2.5
2,594,844	-		Psyr_2231	0.71	+1.9
2,594,844	-		Psyr_2231	0.71	-0.7
2,594,844	-		Psyr_2231	0.71	-0.9
2,595,420	+		Psyr_2232	0.27	-0.8
2,595,420	+		Psyr_2232	0.27	+0.9
2,595,420	+		Psyr_2232	0.27	-0.9
2,595,421	-		Psyr_2232	0.27	-2.2
2,595,822	+		Psyr_2232	0.58	-0.0
2,595,823	-		Psyr_2232	0.58	+0.1
2,595,835	+		Psyr_2232	0.59	-1.1
2,595,836	-		Psyr_2232	0.59	+1.9
2,596,224	+		Psyr_2232	0.89	-0.5
2,596,224	+		Psyr_2232	0.89	-0.6
2,596,224	+		Psyr_2232	0.89	-2.3
2,596,225	-		Psyr_2232	0.89	-2.0
2,596,225	-		Psyr_2232	0.89	+1.5
2,596,237	-		Psyr_2232	0.90	-2.2
2,596,340	-				-1.6
2,596,374	-				-2.2
2,596,377	-				-1.3
2,596,377	-				-2.3
2,596,394	+				-2.1
2,596,424	+				+0.2
2,597,025	-				+1.5
2,597,025	-				+2.9
2,597,062	+				-1.3
2,597,062	+				+3.1
2,597,062	+				+3.7
2,597,064	+				+2.2
2,597,064	+				-0.8
2,597,064	+				+0.7
2,597,065	-				-0.1
2,597,117	+				-0.4
2,597,124	+				+3.3
2,597,124	+				-1.0
2,597,124	+				+1.9
2,597,125	-				+2.5
2,597,125	-				+2.2
2,597,165	+				+3.1
2,597,166	-				-0.5
2,597,171	+				-0.6
2,597,172	-				+2.7
2,597,363	-		Psyr_2235	0.17	-2.1