Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2229

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,589,728	+				-0.9
2,589,729	-				+1.9
2,589,729	-				+2.5
2,590,111	+		Psyr_2228	0.47	-2.4
2,590,112	-		Psyr_2228	0.47	+0.5
2,590,112	-		Psyr_2228	0.47	+3.0
2,590,112	-		Psyr_2228	0.47	-1.1
2,590,112	-		Psyr_2228	0.47	+3.6
2,590,126	+		Psyr_2228	0.49	+2.2
2,590,126	+		Psyr_2228	0.49	-0.1
2,590,127	-		Psyr_2228	0.49	+2.5
2,590,136	+		Psyr_2228	0.50	-0.4
2,590,136	+		Psyr_2228	0.50	+2.2
2,590,137	-		Psyr_2228	0.50	-1.5
2,590,137	-		Psyr_2228	0.50	-1.6
2,590,325	-		Psyr_2228	0.76	-2.1
2,590,530	+				+4.5
2,590,531	-				+2.5
2,590,580	-				+1.9
2,590,611	+				+1.5
2,590,611	+				-4.2
2,590,611	+				-0.1
2,590,612	-				+2.2
2,590,712	+				-0.0
2,590,773	+		Psyr_2229	0.10	+1.9
2,590,773	+		Psyr_2229	0.10	+1.5
2,590,774	-		Psyr_2229	0.10	-0.5
2,590,779	+		Psyr_2229	0.11	+3.2
2,590,827	+		Psyr_2229	0.13	+2.5
2,590,828	-		Psyr_2229	0.13	+3.9
2,590,828	-		Psyr_2229	0.13	+1.3
2,590,923	+		Psyr_2229	0.18	-0.1
2,591,331	+		Psyr_2229	0.37	+3.2
2,591,416	-		Psyr_2229	0.41	+2.5
2,591,472	+		Psyr_2229	0.44	+2.5
2,591,472	+		Psyr_2229	0.44	-0.1
2,591,472	+		Psyr_2229	0.44	+1.9
2,591,472	+		Psyr_2229	0.44	-2.1
2,591,472	+		Psyr_2229	0.44	-1.5
2,591,472	+		Psyr_2229	0.44	-1.2
2,591,472	+		Psyr_2229	0.44	+2.2
2,591,473	-		Psyr_2229	0.44	-1.5
2,591,473	-		Psyr_2229	0.44	+2.9
2,591,473	-		Psyr_2229	0.44	-2.5
2,591,473	-		Psyr_2229	0.44	-0.5
2,591,473	-		Psyr_2229	0.44	-0.4
2,591,530	-		Psyr_2229	0.46	+4.7
2,591,785	+		Psyr_2229	0.58	-1.8
2,591,785	+		Psyr_2229	0.58	+1.5
2,591,786	-		Psyr_2229	0.58	-1.7
2,591,984	+		Psyr_2229	0.68	+3.9
2,591,984	+		Psyr_2229	0.68	+0.9
2,591,984	+		Psyr_2229	0.68	+2.5
2,591,985	-		Psyr_2229	0.68	-1.5
2,591,985	-		Psyr_2229	0.68	+0.9
2,591,985	-		Psyr_2229	0.68	-1.8
2,591,985	-		Psyr_2229	0.68	-0.0
2,592,124	+		Psyr_2229	0.74	+1.9
2,592,223	+		Psyr_2229	0.79	+1.5
2,592,224	-		Psyr_2229	0.79	+2.5
2,592,233	-		Psyr_2229	0.80	-2.3
2,592,288	+		Psyr_2229	0.82	+1.9
2,592,288	+		Psyr_2229	0.82	-1.3
2,592,288	+		Psyr_2229	0.82	-0.1
2,592,289	-		Psyr_2229	0.82	-1.2
2,592,328	-		Psyr_2229	0.84	-1.9
2,592,349	+		Psyr_2229	0.85	+1.5
2,592,741	+				+2.7
2,592,741	+				+1.9
2,592,742	-				+2.5
2,592,754	+				+2.9
2,592,793	+				+2.9
2,592,794	-				-1.6
2,592,947	+				+3.5
2,592,948	-				+1.9
2,592,988	+		Psyr_2230	0.10	-1.9
2,593,021	-		Psyr_2230	0.13	+2.5
2,593,271	+		Psyr_2230	0.32	-2.7
2,593,271	+		Psyr_2230	0.32	+1.9
2,593,271	+		Psyr_2230	0.32	-1.0
2,593,271	+		Psyr_2230	0.32	-0.3
2,593,271	+		Psyr_2230	0.32	+3.5
2,593,271	+		Psyr_2230	0.32	+0.9
2,593,271	+		Psyr_2230	0.32	+3.0
2,593,272	-		Psyr_2230	0.32	-3.1
2,593,272	-		Psyr_2230	0.32	-1.9
2,593,272	-		Psyr_2230	0.32	-2.6
2,593,478	+		Psyr_2230	0.48	+3.6
2,593,479	-		Psyr_2230	0.48	+1.3
2,593,495	-		Psyr_2230	0.49	-1.8
2,593,510	+		Psyr_2230	0.50	-0.1