Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2212

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,569,788	+		Psyr_2211	0.45	+1.1
2,569,791	+		Psyr_2211	0.45	+2.6
2,569,791	+		Psyr_2211	0.45	-3.4
2,569,791	+		Psyr_2211	0.45	-3.7
2,569,859	-		Psyr_2211	0.50	-1.3
2,570,232	+		Psyr_2211	0.78	+2.4
2,570,415	+				+3.5
2,570,560	+				+3.9
2,570,560	+				+2.7
2,570,560	+				-1.1
2,570,560	+				-1.4
2,570,561	-				+2.1
2,570,561	-				+1.4
2,570,607	-				+2.1
2,570,721	+				-1.2
2,570,879	+		Psyr_2212	0.17	+2.4
2,571,133	+		Psyr_2212	0.46	-1.1
2,571,133	+		Psyr_2212	0.46	-1.8
2,571,133	+		Psyr_2212	0.46	-0.1
2,571,133	+		Psyr_2212	0.46	+1.4
2,571,133	+		Psyr_2212	0.46	-2.1
2,571,133	+		Psyr_2212	0.46	-0.9
2,571,134	-		Psyr_2212	0.46	+0.2
2,571,134	-		Psyr_2212	0.46	+4.1
2,571,134	-		Psyr_2212	0.46	+4.2
2,571,134	-		Psyr_2212	0.46	-0.4
2,571,134	-		Psyr_2212	0.46	-4.3
2,571,134	-		Psyr_2212	0.46	+2.9
2,571,134	-		Psyr_2212	0.46	+3.7
2,571,134	-		Psyr_2212	0.46	+4.2
2,571,134	-		Psyr_2212	0.46	+1.9
2,571,134	-		Psyr_2212	0.46	+0.4
2,571,313	+		Psyr_2212	0.66	+2.7
2,571,753	+				-2.0
2,572,130	+		Psyr_2213	0.41	+3.8
2,572,130	+		Psyr_2213	0.41	+2.9
2,572,130	+		Psyr_2213	0.41	+1.3
2,572,130	+		Psyr_2213	0.41	+3.9
2,572,525	+		Psyr_2213	0.83	-1.7
2,572,526	-		Psyr_2213	0.83	-1.8
2,572,526	-		Psyr_2213	0.83	+0.9
2,572,602	+				-2.3
2,572,603	-				+0.0