Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2196

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,552,836	-				+2.4
2,552,838	+				+1.8
2,552,838	+				+3.4
2,552,907	+				+0.4
2,553,103	-		Psyr_2195	0.18	-0.8
2,553,346	+		Psyr_2195	0.46	-2.9
2,553,346	+		Psyr_2195	0.46	-4.5
2,553,346	+		Psyr_2195	0.46	+3.6
2,553,347	-		Psyr_2195	0.46	-1.4
2,553,347	-		Psyr_2195	0.46	-4.0
2,553,347	-		Psyr_2195	0.46	-1.4
2,553,347	-		Psyr_2195	0.46	-1.2
2,553,347	-		Psyr_2195	0.46	+0.4
2,553,347	-		Psyr_2195	0.46	-0.9
2,553,398	+		Psyr_2195	0.52	-4.6
2,553,399	-		Psyr_2195	0.52	-2.4
2,553,399	-		Psyr_2195	0.52	-0.7
2,553,457	-		Psyr_2195	0.59	+0.0
2,553,457	-		Psyr_2195	0.59	+2.8
2,553,637	-		Psyr_2195	0.80	-0.2
2,553,723	+				+1.4
2,553,723	+				+3.1
2,553,723	+				-4.7
2,553,724	-				-0.1
2,553,724	-				+1.8
2,553,724	-				-4.0
2,553,724	-				+0.8
2,553,724	-				-1.9
2,553,757	+				-1.1
2,553,757	+				-3.1
2,553,757	+				-1.0
2,553,758	-				-1.8
2,553,758	-				+3.3
2,553,758	-				-2.2
2,553,758	-				-2.3
2,553,758	-				+3.3
2,553,953	+		Psyr_2196	0.22	-3.6
2,553,953	+		Psyr_2196	0.22	-2.7
2,553,954	-		Psyr_2196	0.22	-1.9
2,553,954	-		Psyr_2196	0.22	+0.1
2,553,972	+		Psyr_2196	0.25	-1.1
2,554,508	+				+1.4
2,554,509	-				-0.1
2,554,568	+				+3.3
2,554,802	+		Psyr_2197	0.18	+3.5
2,554,803	-		Psyr_2197	0.18	+2.6
2,554,940	+		Psyr_2197	0.26	-3.3
2,554,940	+		Psyr_2197	0.26	+2.1
2,554,940	+		Psyr_2197	0.26	+1.8
2,554,941	-		Psyr_2197	0.26	+3.0
2,554,941	-		Psyr_2197	0.26	+2.1
2,554,941	-		Psyr_2197	0.26	+2.6
2,554,941	-		Psyr_2197	0.26	+2.6
2,554,948	+		Psyr_2197	0.26	-3.3
2,554,949	-		Psyr_2197	0.27	-0.6
2,554,979	+		Psyr_2197	0.28	-0.4
2,554,979	+		Psyr_2197	0.28	+4.2
2,554,991	+		Psyr_2197	0.29	-0.2
2,554,991	+		Psyr_2197	0.29	+0.8
2,555,280	+		Psyr_2197	0.46	+0.5
2,555,281	-		Psyr_2197	0.46	+1.8
2,555,281	-		Psyr_2197	0.46	-2.6
2,555,291	+		Psyr_2197	0.46	+2.4
2,555,292	-		Psyr_2197	0.47	+1.4
2,555,390	+		Psyr_2197	0.52	+2.1
2,555,390	+		Psyr_2197	0.52	+1.0
2,555,390	+		Psyr_2197	0.52	-1.8
2,555,391	-		Psyr_2197	0.52	+0.2
2,555,391	-		Psyr_2197	0.52	+1.8