Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2114

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,472,083	+		Psyr_2113	0.74	+2.9
2,472,083	+		Psyr_2113	0.74	+0.3
2,472,084	-		Psyr_2113	0.74	+2.2
2,472,084	-		Psyr_2113	0.74	-0.1
2,472,084	-		Psyr_2113	0.74	+1.5
2,472,112	-		Psyr_2113	0.75	+3.6
2,472,112	-		Psyr_2113	0.75	-1.6
2,472,365	+		Psyr_2113	0.82	-0.8
2,472,365	+		Psyr_2113	0.82	-2.6
2,472,365	+		Psyr_2113	0.82	-1.1
2,472,365	+		Psyr_2113	0.82	-0.1
2,472,365	+		Psyr_2113	0.82	-1.0
2,472,365	+		Psyr_2113	0.82	-0.1
2,472,365	+		Psyr_2113	0.82	-1.3
2,472,365	+		Psyr_2113	0.82	+2.2
2,472,365	+		Psyr_2113	0.82	+3.7
2,472,365	+		Psyr_2113	0.82	+3.9
2,472,366	-		Psyr_2113	0.82	-2.5
2,472,366	-		Psyr_2113	0.82	+3.3
2,472,366	-		Psyr_2113	0.82	-0.4
2,472,366	-		Psyr_2113	0.82	+1.9
2,472,366	-		Psyr_2113	0.82	+2.0
2,472,446	+		Psyr_2113	0.84	-0.1
2,472,446	+		Psyr_2113	0.84	+3.9
2,472,446	+		Psyr_2113	0.84	+2.7
2,472,446	+		Psyr_2113	0.84	-1.0
2,472,446	+		Psyr_2113	0.84	-1.0
2,472,500	+		Psyr_2113	0.86	+1.5
2,472,506	+		Psyr_2113	0.86	-0.8
2,472,506	+		Psyr_2113	0.86	-0.8
2,472,780	-				-1.6
2,472,877	-				-1.7
2,472,929	+				-4.4
2,472,929	+				-5.0
2,472,930	-				-1.2
2,472,970	+				+1.5
2,472,970	+				-0.1
2,472,970	+				-1.2
2,472,971	-				-2.3
2,472,971	-				-2.9
2,472,995	-				+2.2
2,472,997	+				-0.1
2,472,998	-				+2.7
2,472,998	-				+4.1
2,473,115	+		Psyr_2114	0.13	-1.9
2,473,115	+		Psyr_2114	0.13	-4.7
2,473,153	-		Psyr_2114	0.19	+2.5
2,473,182	+		Psyr_2114	0.24	-1.7
2,473,183	-		Psyr_2114	0.24	-0.1
2,473,192	-		Psyr_2114	0.26	+1.5
2,473,294	+		Psyr_2114	0.41	-1.6
2,473,305	+		Psyr_2114	0.43	+1.9
2,473,448	+		Psyr_2114	0.66	-0.1
2,473,448	+		Psyr_2114	0.66	-2.4
2,473,448	+		Psyr_2114	0.66	+2.2
2,473,449	-		Psyr_2114	0.66	-1.0
2,473,695	+				-0.1
2,473,743	+				-2.2
2,473,743	+				+2.9
2,473,743	+				-0.5
2,473,743	+				-2.0
2,473,745	+				-1.4
2,473,797	+				+2.5
2,473,804	+				-2.4
2,473,804	+				-2.9
2,473,961	+				-0.7
2,473,961	+				-0.1
2,473,961	+				-1.7
2,473,961	+				+0.4
2,473,962	-				-3.7
2,473,962	-				-0.1
2,474,132	+		Psyr_2115	0.30	-0.1
2,474,132	+		Psyr_2115	0.30	-0.3
2,474,133	-		Psyr_2115	0.31	+1.5
2,474,317	+		Psyr_2115	0.77	+3.6
2,474,317	+		Psyr_2115	0.77	-1.0
2,474,318	-		Psyr_2115	0.78	-1.7
2,474,393	+				+2.5
2,474,393	+				-1.0
2,474,394	-				-1.4
2,474,522	-				-0.8
2,474,522	-				-0.2
2,474,548	+				+2.5
2,474,570	+				+3.1
2,474,571	-				+1.5
2,474,571	-				+0.9
2,474,571	-				-3.3
2,474,571	-				+1.9
2,474,656	+				+3.1
2,474,656	+				+0.9
2,474,656	+				-0.1
2,474,656	+				+3.8
2,474,656	+				-0.6
2,474,656	+				-5.5
2,474,656	+				-0.9
2,474,656	+				+1.4
2,474,656	+				+1.9
2,474,656	+				-1.0
2,474,656	+				-0.7
2,474,656	+				+2.7
2,474,657	-				-0.8
2,474,657	-				+2.9
2,474,657	-				-1.7
2,474,657	-				+1.2
2,474,657	-				+3.2
2,474,657	-				+3.1
2,474,657	-				+2.7
2,474,657	-				-0.4
2,474,657	-				+1.5
2,474,657	-				-2.1
2,474,657	-				-1.3
2,474,658	+				+1.5
2,474,658	+				+1.5
2,474,658	+				+3.7
2,474,659	-				-1.3
2,474,659	-				-0.5
2,474,659	-				+3.3