Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2112

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,467,994	-		Psyr_2111	0.57	-2.0
2,468,210	+		Psyr_2111	0.71	+1.5
2,468,210	+		Psyr_2111	0.71	+1.5
2,468,210	+		Psyr_2111	0.71	+2.7
2,468,210	+		Psyr_2111	0.71	+2.5
2,468,211	-		Psyr_2111	0.71	-0.5
2,468,211	-		Psyr_2111	0.71	-0.9
2,468,211	-		Psyr_2111	0.71	+3.1
2,468,258	-		Psyr_2111	0.75	+1.5
2,468,289	+		Psyr_2111	0.77	-0.9
2,468,386	-		Psyr_2111	0.83	-2.6
2,468,386	-		Psyr_2111	0.83	+2.7
2,468,386	-		Psyr_2111	0.83	-0.1
2,468,452	+		Psyr_2111	0.88	-2.3
2,468,574	-				-0.1
2,468,634	+				+3.3
2,468,643	-				+2.9
2,468,694	+				-1.2
2,468,705	+				-0.3
2,468,720	+				+2.9
2,468,724	+				+2.2
2,468,724	+				+3.2
2,468,724	+				-0.8
2,468,724	+				-3.0
2,468,724	+				+3.5
2,468,724	+				-2.4
2,468,724	+				+3.6
2,468,724	+				+0.1
2,468,724	+				-1.3
2,468,724	+				+2.7
2,468,724	+				-0.9
2,468,724	+				+3.1
2,468,724	+				+3.2
2,468,725	-				+2.5
2,468,725	-				-1.1
2,468,725	-				+2.3
2,468,725	-				+3.6
2,468,725	-				+2.7
2,468,725	-				+0.6
2,468,725	-				-2.8
2,468,725	-				-1.9
2,468,725	-				-0.8
2,468,725	-				+1.5
2,468,725	-				-0.9
2,468,725	-				+2.5
2,468,726	+				-0.9
2,468,726	+				-1.1
2,468,726	+				+3.3
2,468,727	-				-3.1
2,468,729	+				+2.7
2,468,778	+				+1.8
2,468,790	+				-2.3
2,468,791	-				-0.7
2,468,840	+				+0.0
2,468,949	+				-1.1
2,468,949	+				-0.3
2,468,949	+				-0.4
2,468,950	-				+0.9
2,468,950	-				+2.7
2,469,136	+		Psyr_2112	0.49	-1.0
2,469,137	-		Psyr_2112	0.49	-1.9
2,469,137	-		Psyr_2112	0.49	+2.7
2,469,316	-				+2.9
2,469,479	+				-2.7
2,469,479	+				-1.5
2,469,479	+				+3.2
2,469,480	-				+3.9
2,469,480	-				+3.1
2,469,480	-				-0.3
2,469,480	-				-2.6
2,469,637	+				+3.1
2,469,640	+				-1.7
2,469,641	-				-0.3