Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2110

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,464,232	+		Psyr_2109	0.80	+3.1
2,464,290	+		Psyr_2109	0.84	+0.4
2,464,552	+				-4.2
2,464,552	+				+1.5
2,464,552	+				-1.0
2,464,552	+				+1.5
2,464,552	+				-0.1
2,464,552	+				+2.5
2,464,553	-				+1.5
2,464,631	+				+1.9
2,464,631	+				+0.8
2,464,631	+				+4.1
2,464,657	-				-2.1
2,464,660	+				-1.4
2,464,660	+				-1.0
2,464,661	-				+3.1
2,464,661	-				+3.1
2,464,663	-				+4.0
2,464,694	+				-0.7
2,464,694	+				+3.1
2,464,695	-				-0.8
2,464,719	+				+0.5
2,464,719	+				+2.7
2,464,719	+				+1.5
2,464,719	+				+2.2
2,464,720	-				+2.7
2,464,720	-				-1.9
2,464,720	-				-0.3
2,464,720	-				+3.5
2,464,821	+				+3.9
2,464,821	+				-0.5
2,464,821	+				+2.2
2,464,821	+				+2.5
2,464,821	+				+1.9
2,464,822	-				-3.1
2,464,822	-				+0.1
2,464,822	-				-2.4
2,464,855	+				-3.1
2,464,855	+				-2.5
2,464,855	+				-0.1
2,464,856	-				-2.7
2,464,856	-				+3.3
2,464,856	-				-0.1
2,464,968	+		Psyr_2110	0.10	+2.5
2,464,968	+		Psyr_2110	0.10	-1.8
2,464,972	+		Psyr_2110	0.11	-1.9
2,464,972	+		Psyr_2110	0.11	+1.9
2,464,973	-		Psyr_2110	0.11	-1.6
2,464,973	-		Psyr_2110	0.11	+3.9
2,465,041	+		Psyr_2110	0.13	-0.6
2,465,042	-		Psyr_2110	0.13	+0.9
2,465,042	-		Psyr_2110	0.13	-1.5
2,465,042	-		Psyr_2110	0.13	-2.4
2,465,042	-		Psyr_2110	0.13	+3.5
2,465,055	+		Psyr_2110	0.14	+3.5
2,465,055	+		Psyr_2110	0.14	-0.1
2,465,055	+		Psyr_2110	0.14	-1.2
2,465,056	-		Psyr_2110	0.14	+2.2
2,465,126	+		Psyr_2110	0.17	+1.5
2,465,347	+		Psyr_2110	0.26	+1.2
2,465,348	-		Psyr_2110	0.26	-1.0
2,465,348	-		Psyr_2110	0.26	+1.0
2,465,348	-		Psyr_2110	0.26	-1.0
2,465,348	-		Psyr_2110	0.26	+0.8
2,465,410	+		Psyr_2110	0.29	+0.6
2,465,410	+		Psyr_2110	0.29	+1.5
2,465,411	-		Psyr_2110	0.29	-1.1
2,465,560	+		Psyr_2110	0.35	+2.2
2,465,560	+		Psyr_2110	0.35	+0.6
2,465,561	-		Psyr_2110	0.35	-0.1
2,465,561	-		Psyr_2110	0.35	-0.5
2,465,561	-		Psyr_2110	0.35	+2.7
2,465,561	-		Psyr_2110	0.35	+0.7
2,465,561	-		Psyr_2110	0.35	-1.3
2,465,561	-				+1.5
2,465,710	+		Psyr_2110	0.41	+0.2
2,465,711	-		Psyr_2110	0.41	-2.6
2,465,959	+		Psyr_2110	0.52	-3.2
2,465,960	-		Psyr_2110	0.52	+3.6
2,465,960	-		Psyr_2110	0.52	-0.8
2,466,063	+		Psyr_2110	0.56	-0.3
2,466,063	+		Psyr_2110	0.56	-0.6
2,466,278	-		Psyr_2110	0.65	-3.5
2,466,278	-		Psyr_2110	0.65	+1.0
2,466,652	+		Psyr_2110	0.81	-0.7
2,466,652	+		Psyr_2110	0.81	-1.5
2,466,653	-		Psyr_2110	0.81	+3.5
2,466,653	-		Psyr_2110	0.81	-0.3
2,466,718	-		Psyr_2110	0.84	-1.5
2,466,877	-				+1.0
2,466,913	+				+3.2
2,467,060	+				-0.9
2,467,223	+				-2.1
2,467,223	+				-1.8
2,467,224	-				+0.3
2,467,836	+		Psyr_2111	0.46	+2.9
2,467,837	-		Psyr_2111	0.46	+1.9
2,467,837	-		Psyr_2111	0.46	+2.5
2,467,837	-		Psyr_2111	0.46	-1.8
2,467,840	+		Psyr_2111	0.46	-2.0
2,467,840	+		Psyr_2111	0.46	-1.5
2,467,840	+		Psyr_2111	0.46	+2.2
2,467,840	+		Psyr_2111	0.46	+2.7
2,467,841	-		Psyr_2111	0.46	+3.8
2,467,863	+		Psyr_2111	0.48	+4.0
2,467,863	+		Psyr_2111	0.48	+1.9
2,467,864	-		Psyr_2111	0.48	+1.5
2,467,864	-		Psyr_2111	0.48	-0.3
2,467,864	-		Psyr_2111	0.48	-0.9
2,467,864	-		Psyr_2111	0.48	-2.4
2,467,864	-		Psyr_2111	0.48	+3.7
2,467,864	-		Psyr_2111	0.48	-1.1
2,467,994	-		Psyr_2111	0.57	-2.0