Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2104

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,454,930	-		Psyr_2103	0.25	+0.9
2,454,930	-		Psyr_2103	0.25	+2.5
2,455,058	+		Psyr_2103	0.35	-1.0
2,455,058	+		Psyr_2103	0.35	+1.5
2,455,058	+		Psyr_2103	0.35	+0.9
2,455,059	-		Psyr_2103	0.35	+3.6
2,455,059	-		Psyr_2103	0.35	+3.1
2,455,061	+		Psyr_2103	0.35	+3.1
2,455,061	+		Psyr_2103	0.35	+3.1
2,455,061	+		Psyr_2103	0.35	+2.5
2,455,062	-		Psyr_2103	0.35	+1.9
2,455,062	-		Psyr_2103	0.35	+2.2
2,455,062	-		Psyr_2103	0.35	-0.3
2,455,098	+		Psyr_2103	0.38	-0.1
2,455,099	-		Psyr_2103	0.38	-0.6
2,455,184	+		Psyr_2103	0.45	-0.1
2,455,184	+		Psyr_2103	0.45	-0.9
2,455,184	+		Psyr_2103	0.45	+2.7
2,455,184	+		Psyr_2103	0.45	+2.7
2,455,185	-		Psyr_2103	0.45	+0.8
2,455,265	+		Psyr_2103	0.52	-1.0
2,455,265	+		Psyr_2103	0.52	+0.8
2,455,265	+		Psyr_2103	0.52	-0.5
2,455,265	+		Psyr_2103	0.52	-3.0
2,455,265	+		Psyr_2103	0.52	+1.9
2,455,266	-		Psyr_2103	0.52	-1.6
2,455,266	-		Psyr_2103	0.52	-1.4
2,455,266	-		Psyr_2103	0.52	+3.2
2,455,266	-		Psyr_2103	0.52	+3.2
2,455,266	-		Psyr_2103	0.52	-2.6
2,455,282	+		Psyr_2103	0.53	+4.0
2,455,282	+		Psyr_2103	0.53	+2.5
2,455,434	+		Psyr_2103	0.65	+0.0
2,455,490	+		Psyr_2103	0.70	-0.4
2,455,490	+		Psyr_2103	0.70	-0.1
2,455,490	+		Psyr_2103	0.70	-2.6
2,455,490	+		Psyr_2103	0.70	+2.9
2,455,491	-		Psyr_2103	0.70	-0.1
2,455,511	+		Psyr_2103	0.71	+0.1
2,455,512	-		Psyr_2103	0.71	+2.7
2,455,514	+		Psyr_2103	0.72	+3.2
2,455,514	+		Psyr_2103	0.72	-1.1
2,455,514	+		Psyr_2103	0.72	-1.9
2,455,540	+		Psyr_2103	0.74	-0.6
2,455,541	-		Psyr_2103	0.74	-3.4
2,455,578	-		Psyr_2103	0.77	+2.2
2,455,673	+		Psyr_2103	0.84	-0.3
2,455,674	-		Psyr_2103	0.84	-3.6
2,455,745	+				+1.5
2,455,820	+				+4.0
2,455,820	+				-0.7
2,455,820	+				+2.9
2,455,820	+				-1.5
2,455,821	-				+0.9
2,455,821	-				+2.2
2,455,821	-				+1.9
2,455,821	-				+2.9
2,456,016	+		Psyr_2104	0.15	-0.1
2,456,016	+		Psyr_2104	0.15	-2.1
2,456,016	+		Psyr_2104	0.15	+3.3
2,456,016	+		Psyr_2104	0.15	-2.5
2,456,016	+		Psyr_2104	0.15	-1.1
2,456,016	+		Psyr_2104	0.15	+0.9
2,456,016	+		Psyr_2104	0.15	+1.5
2,456,016	+		Psyr_2104	0.15	-4.2
2,456,016	+		Psyr_2104	0.15	-0.5
2,456,017	-		Psyr_2104	0.16	-2.0
2,456,017	-		Psyr_2104	0.16	-0.1
2,456,017	-		Psyr_2104	0.16	-0.4
2,456,205	+		Psyr_2104	0.48	-0.1
2,456,205	+		Psyr_2104	0.48	-0.7
2,456,206	-		Psyr_2104	0.48	+1.0
2,456,208	-		Psyr_2104	0.49	-2.0
2,456,208	-		Psyr_2104	0.49	-2.5
2,456,208	-		Psyr_2104	0.49	-0.1
2,456,208	-		Psyr_2104	0.49	-1.4
2,456,208	-		Psyr_2104	0.49	-0.1
2,456,437	+		Psyr_2104	0.89	+2.5
2,456,484	+				-1.2
2,456,485	-				-3.1
2,456,493	+				+1.9
2,456,506	+				-1.3
2,456,506	+				+1.9
2,456,507	-				+2.7
2,456,507	-				+2.2
2,456,570	+				+0.1
2,456,570	+				-1.8
2,456,571	-				+2.7
2,456,683	+		Psyr_2105	0.14	+3.1
2,456,798	-		Psyr_2105	0.23	-2.9
2,456,995	-		Psyr_2105	0.39	-0.5
2,457,266	-		Psyr_2105	0.62	+2.2
2,457,268	+		Psyr_2105	0.62	-3.1
2,457,269	-		Psyr_2105	0.62	+0.3
2,457,481	+		Psyr_2105	0.80	-1.4