Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2089

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,435,622	+		Psyr_2088	0.21	+1.8
2,435,623	-		Psyr_2088	0.21	+1.5
2,436,228	+		Psyr_2088	0.72	-0.1
2,436,589	+				-1.2
2,436,590	-				+3.4
2,436,881	-		Psyr_2089	0.36	+0.9
2,436,916	+		Psyr_2089	0.40	-3.6
2,436,916	+		Psyr_2089	0.40	+0.9
2,436,916	+		Psyr_2089	0.40	+2.7
2,436,916	+		Psyr_2089	0.40	+2.9
2,436,916	+		Psyr_2089	0.40	-3.5
2,436,916	+		Psyr_2089	0.40	-2.5
2,436,917	-		Psyr_2089	0.40	-1.0
2,436,917	-		Psyr_2089	0.40	-0.6
2,436,917	-		Psyr_2089	0.40	-1.2
2,436,917	-		Psyr_2089	0.40	+0.9
2,436,917	-		Psyr_2089	0.40	-1.4
2,436,917	-		Psyr_2089	0.40	+0.0
2,436,979	+		Psyr_2089	0.48	-0.1
2,436,980	-		Psyr_2089	0.48	-4.5
2,436,980	-		Psyr_2089	0.48	+3.4
2,436,982	+		Psyr_2089	0.48	-2.0
2,436,983	-		Psyr_2089	0.48	+1.9
2,437,045	+		Psyr_2089	0.56	-1.4
2,437,046	-		Psyr_2089	0.56	-0.1
2,437,046	-		Psyr_2089	0.56	-5.4
2,437,055	+		Psyr_2089	0.57	-3.6
2,437,055	+		Psyr_2089	0.57	-1.7
2,437,055	+		Psyr_2089	0.57	-1.9
2,437,087	+		Psyr_2089	0.61	-2.5
2,437,103	+		Psyr_2089	0.63	+0.9
2,437,103	+		Psyr_2089	0.63	+0.5
2,437,103	+		Psyr_2089	0.63	-0.4
2,437,103	+		Psyr_2089	0.63	-1.2
2,437,103	+		Psyr_2089	0.63	+2.2
2,437,104	-		Psyr_2089	0.63	-1.3
2,437,104	-		Psyr_2089	0.63	+2.5
2,437,104	-		Psyr_2089	0.63	+3.1
2,437,104	-		Psyr_2089	0.63	-2.0
2,437,257	+		Psyr_2089	0.82	-0.1
2,437,291	+		Psyr_2089	0.86	-2.0
2,437,291	+		Psyr_2089	0.86	-1.3
2,437,292	-		Psyr_2089	0.86	+3.7
2,437,292	-		Psyr_2089	0.86	-1.3
2,437,316	+		Psyr_2089	0.89	-0.2
2,437,316	+		Psyr_2089	0.89	+2.2
2,437,449	+				+2.5
2,437,449	+				-0.3
2,437,449	+				+0.7
2,437,449	+				-0.2
2,437,450	-				+2.2
2,437,450	-				+0.2
2,437,450	-				+4.4
2,437,450	-				-2.4
2,437,536	-				-1.2
2,437,536	-				+0.8
2,437,613	-				-0.7
2,437,633	-				+1.9
2,437,637	+				-0.1
2,437,637	+				+1.5
2,437,637	+				-1.0
2,437,637	+				+2.5
2,437,637	+				+2.2
2,437,637	+				+4.2
2,437,638	-				+2.2
2,437,638	-				+2.5
2,437,638	-				-1.9
2,437,638	-				+0.2
2,437,638	-				+1.9
2,437,641	+				-2.9
2,437,641	+				-1.4
2,437,641	+				-2.5
2,437,641	+				+3.9
2,437,641	+				+3.1
2,437,642	-				-1.3
2,437,642	-				+1.9
2,437,642	-				+2.2
2,437,642	-				-2.9
2,437,642	-				+3.5
2,437,642	-				-2.1
2,437,674	+				+1.5
2,437,674	+				+0.6
2,437,674	+				+1.9
2,437,674	+				-1.9
2,437,674	+				-2.5
2,437,675	-				-1.2
2,437,675	-				-0.3
2,437,940	-		Psyr_2090	0.13	-0.5
2,438,337	-		Psyr_2090	0.30	-0.9
2,438,337	-		Psyr_2090	0.30	-0.6