Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2083

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,428,132	+		Psyr_2082	0.54	+2.7
2,428,132	+		Psyr_2082	0.54	-1.0
2,428,133	-		Psyr_2082	0.54	-1.9
2,428,133	-		Psyr_2082	0.54	+2.5
2,428,194	+		Psyr_2082	0.58	+4.2
2,428,224	+		Psyr_2082	0.60	+1.9
2,428,507	+		Psyr_2082	0.78	-1.8
2,428,507	+		Psyr_2082	0.78	+2.5
2,428,507	+		Psyr_2082	0.78	+0.4
2,428,624	+		Psyr_2082	0.86	+2.7
2,428,624	+		Psyr_2082	0.86	-1.8
2,428,624	+		Psyr_2082	0.86	+0.0
2,428,624	+		Psyr_2082	0.86	+1.9
2,428,625	-		Psyr_2082	0.86	-0.3
2,428,625	-		Psyr_2082	0.86	+0.9
2,428,765	+				+2.5
2,428,827	-				+3.4
2,428,827	-				+3.5
2,428,827	-				+3.3
2,428,827	-				-0.1
2,428,844	+				+2.5
2,428,845	-				+1.5
2,428,892	+				-0.6
2,428,893	-				-1.7
2,428,893	-				+1.9
2,428,896	+				+2.3
2,428,896	+				+2.9
2,428,896	+				-0.8
2,428,897	-		Psyr_2083	0.10	-0.9
2,428,897	-		Psyr_2083	0.10	+1.5
2,428,897	-		Psyr_2083	0.10	+3.1
2,428,993	+		Psyr_2083	0.28	-1.4
2,428,993	+		Psyr_2083	0.28	-2.3
2,428,993	+		Psyr_2083	0.28	-2.5
2,428,993	+		Psyr_2083	0.28	+0.7
2,428,993	+		Psyr_2083	0.28	-2.0
2,428,993	+		Psyr_2083	0.28	+3.9
2,428,993	+		Psyr_2083	0.28	-1.4
2,428,994	-		Psyr_2083	0.28	-3.9
2,428,994	-		Psyr_2083	0.28	-1.1
2,428,994	-		Psyr_2083	0.28	+0.9
2,428,994	-		Psyr_2083	0.28	-0.9
2,428,994	-		Psyr_2083	0.28	+3.1
2,428,994	-		Psyr_2083	0.28	-1.6
2,429,134	+		Psyr_2083	0.54	-0.1
2,429,134	+		Psyr_2083	0.54	+1.9
2,429,134	+		Psyr_2083	0.54	-2.3
2,429,134	+		Psyr_2083	0.54	+0.4
2,429,134	+		Psyr_2083	0.54	+2.3
2,429,134	+		Psyr_2083	0.54	+1.5
2,429,134	+		Psyr_2083	0.54	+0.9
2,429,134	+		Psyr_2083	0.54	+1.9
2,429,134	+		Psyr_2083	0.54	-1.3
2,429,134	+		Psyr_2083	0.54	+3.4
2,429,134	+		Psyr_2083	0.54	+2.9
2,429,134	+		Psyr_2083	0.54	+0.3
2,429,134	+		Psyr_2083	0.54	+0.3
2,429,134	+		Psyr_2083	0.54	+1.5
2,429,134	+		Psyr_2083	0.54	-2.5
2,429,135	-		Psyr_2083	0.54	-0.1
2,429,135	-		Psyr_2083	0.54	+3.8
2,429,135	-		Psyr_2083	0.54	+2.3
2,429,135	-		Psyr_2083	0.54	-1.1
2,429,135	-		Psyr_2083	0.54	-2.1
2,429,135	-		Psyr_2083	0.54	-4.8
2,429,159	+		Psyr_2083	0.59	-1.1
2,429,160	-		Psyr_2083	0.59	-4.2
2,429,285	+		Psyr_2083	0.82	-2.0
2,429,286	-		Psyr_2083	0.82	+1.9
2,429,286	-		Psyr_2083	0.82	+2.9
2,429,301	-		Psyr_2083	0.85	+2.5
2,429,301	-		Psyr_2083	0.85	-1.3
2,429,379	+				-3.8
2,429,379	+				+1.9
2,429,379	+				-2.3
2,429,379	+				-1.6
2,429,380	-				+1.9
2,429,445	+				-0.1
2,429,445	+				+1.9
2,429,509	+				+2.3
2,429,509	+				+3.5
2,429,509	+				-0.2
2,429,510	-				-1.5
2,429,510	-				+2.5
2,429,510	-				-4.6
2,429,510	-				-3.9
2,429,636	+				+1.5
2,429,636	+				+3.5
2,429,636	+				-3.7
2,429,636	+				-2.4
2,429,636	+				+2.5
2,429,636	+				-0.8
2,429,636	+				+0.6
2,429,636	+				-0.5
2,429,636	+				-0.5
2,429,636	+				-1.6
2,429,636	+				+3.4
2,429,636	+				-1.7
2,429,636	+				-1.8
2,429,636	+				-1.3
2,429,636	+				+2.3
2,429,637	-				-2.5
2,429,637	-				+1.0
2,429,637	-				+3.7
2,429,637	-				+2.7
2,429,637	-				-1.6
2,429,751	+		Psyr_2084	0.10	+3.4
2,429,751	+		Psyr_2084	0.10	+2.3
2,429,752	-		Psyr_2084	0.10	-0.1
2,429,825	-		Psyr_2084	0.21	+3.4
2,429,825	-		Psyr_2084	0.21	-0.2
2,429,825	-		Psyr_2084	0.21	-4.2
2,430,079	-		Psyr_2084	0.56	+0.0
2,430,197	-		Psyr_2084	0.72	-0.9