Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2073

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,417,350	+		Psyr_2071	0.73	+1.9
2,417,351	-		Psyr_2071	0.73	-0.9
2,417,451	+				+2.5
2,417,452	-				+1.5
2,417,486	-				-2.9
2,417,486	-				+2.5
2,417,489	+				+0.1
2,417,489	+				-2.6
2,417,489	+				+0.9
2,417,489	+				+2.9
2,417,489	+				-0.4
2,417,489	+				+3.9
2,417,489	+				+3.3
2,417,490	-				-0.3
2,417,490	-				+1.9
2,417,490	-				+0.5
2,417,490	-				+4.3
2,417,490	-				+2.9
2,417,490	-				+1.2
2,417,490	-				+4.5
2,417,490	-				+3.4
2,417,490	-				+3.5
2,417,492	+				-3.9
2,417,493	-				+0.2
2,417,505	+				-2.4
2,417,505	+				-0.1
2,417,505	+				+1.5
2,417,506	-				+3.5
2,417,506	-				-0.1
2,417,506	-				+1.5
2,417,508	+				-2.1
2,417,569	+				-0.1
2,417,702	+				+2.8
2,417,723	+				-0.5
2,417,740	+				-0.1
2,417,741	-				-0.0
2,417,741	-				-0.7
2,417,743	+				+2.3
2,417,743	+				+2.8
2,417,811	+				+1.3
2,417,811	+				-0.8
2,417,811	+				-2.9
2,417,811	+				-0.5
2,417,811	+				+1.0
2,417,811	+				+2.8
2,417,811	+				-0.7
2,417,812	-				+3.1
2,417,812	-				-1.9
2,417,812	-				-0.6
2,417,812	-				+4.5
2,417,956	-				+2.3
2,417,956	-		Psyr_2072	0.40	-1.6
2,417,956	-		Psyr_2072	0.40	+3.5
2,417,964	+		Psyr_2072	0.42	-0.9
2,417,964	+		Psyr_2072	0.42	+3.0
2,417,964	+		Psyr_2072	0.42	-1.3
2,417,964	+		Psyr_2072	0.42	+1.5
2,417,964	+		Psyr_2072	0.42	+1.1
2,417,964	+		Psyr_2072	0.42	+4.0
2,417,964	+		Psyr_2072	0.42	-0.7
2,417,964	+		Psyr_2072	0.42	-1.1
2,417,965	-		Psyr_2072	0.43	+4.0
2,417,965	-		Psyr_2072	0.43	-2.3
2,417,965	-		Psyr_2072	0.43	+3.8
2,417,965	-		Psyr_2072	0.43	+1.0
2,417,965	-		Psyr_2072	0.43	+1.5
2,417,965	-		Psyr_2072	0.43	+2.0
2,417,965	-		Psyr_2072	0.43	-3.2
2,417,965	-		Psyr_2072	0.43	+3.7
2,417,965	-		Psyr_2072	0.43	-2.0
2,417,966	+		Psyr_2072	0.43	-1.5
2,417,966	+		Psyr_2072	0.43	+1.4
2,417,966	+		Psyr_2072	0.43	+4.5
2,417,967	-		Psyr_2072	0.43	+4.1
2,417,974	+		Psyr_2072	0.45	-0.2
2,417,975	-		Psyr_2072	0.45	+1.5
2,417,975	-		Psyr_2072	0.45	-1.4
2,418,111	+		Psyr_2072	0.84	+1.7
2,418,111	+		Psyr_2072	0.84	+2.3
2,418,111	+		Psyr_2072	0.84	+2.3
2,418,111	+		Psyr_2072	0.84	+1.0
2,418,111	+		Psyr_2072	0.84	+0.4
2,418,111	+		Psyr_2072	0.84	+0.4
2,418,112	-		Psyr_2072	0.84	-0.2
2,418,112	-		Psyr_2072	0.84	+1.0
2,418,112	-		Psyr_2072	0.84	-3.4
2,418,112	-		Psyr_2072	0.84	+4.1
2,418,112	-		Psyr_2072	0.84	-4.2
2,418,112	-		Psyr_2072	0.84	-0.2
2,418,112	-		Psyr_2072	0.84	-0.5
2,418,123	+		Psyr_2072	0.87	+0.2
2,418,123	+		Psyr_2072	0.87	-1.8
2,418,123	+		Psyr_2072	0.87	+4.3
2,418,123	+		Psyr_2072	0.87	+2.3
2,418,176	-				-1.2
2,418,176	-				-0.4
2,418,195	-				-0.1
2,418,255	+				-2.5
2,418,255	+				+3.5
2,418,255	+				-1.3
2,418,256	-				-1.2
2,418,603	+		Psyr_2073	0.32	+3.4
2,418,603	+		Psyr_2073	0.32	+1.7
2,418,604	-		Psyr_2073	0.32	+2.0
2,418,604	-		Psyr_2073	0.32	+2.3
2,418,873	+		Psyr_2073	0.57	+2.8
2,419,047	+		Psyr_2073	0.73	+2.0
2,419,047	+		Psyr_2073	0.73	-1.7
2,419,066	-		Psyr_2073	0.75	+3.5
2,419,114	-		Psyr_2073	0.79	+3.3
2,419,448	+				-0.4
2,419,449	-				-1.6
2,419,452	+				+0.4
2,419,452	+				+2.5
2,419,452	+				+2.0
2,419,495	+				+1.0
2,419,495	+				+1.2
2,419,496	-				-1.5
2,419,527	+				+3.8
2,419,763	-		Psyr_2074	0.20	-3.2
2,419,946	+		Psyr_2074	0.39	+2.0
2,419,946	+		Psyr_2074	0.39	+4.1
2,419,947	-		Psyr_2074	0.39	-0.8
2,420,179	+		Psyr_2074	0.63	+0.1
2,420,179	+		Psyr_2074	0.63	+1.0
2,420,179	+		Psyr_2074	0.63	+2.3
2,420,180	-		Psyr_2074	0.63	-1.6
2,420,180	-		Psyr_2074	0.63	-1.5
2,420,180	-		Psyr_2074	0.63	+1.0
2,420,180	-		Psyr_2074	0.63	+0.0
2,420,180	-		Psyr_2074	0.63	+4.4