Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2030

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,353,835	+		Psyr_2029	0.49	-0.7
2,353,836	-		Psyr_2029	0.49	+1.0
2,353,907	+		Psyr_2029	0.56	-1.0
2,353,907	+		Psyr_2029	0.56	-1.3
2,353,908	-		Psyr_2029	0.56	+2.3
2,353,945	-		Psyr_2029	0.60	+2.6
2,354,198	+		Psyr_2029	0.84	+1.6
2,354,198	+		Psyr_2029	0.84	-1.2
2,354,199	-		Psyr_2029	0.84	-1.8
2,354,199	-		Psyr_2029	0.84	+2.0
2,354,199	-		Psyr_2029	0.84	+1.0
2,354,223	+		Psyr_2029	0.86	-0.7
2,354,319	-				+0.4
2,354,467	-				+4.0
2,354,467	-				-0.0
2,354,587	+		Psyr_2030	0.23	-1.7
2,354,615	-		Psyr_2030	0.27	-2.0
2,354,615	-		Psyr_2030	0.27	-0.6
2,354,672	-		Psyr_2030	0.34	+1.6
2,355,135	+				+0.9
2,355,136	-				+3.6
2,355,155	+				-0.8
2,355,253	+				+0.7
2,355,253	+				-3.3
2,355,254	-				+3.6
2,355,254	-				+3.7
2,355,254	-				+1.7
2,355,254	-				-1.1
2,355,254	-				+2.0
2,355,262	+				+2.3
2,355,262	+				+3.2
2,355,262	+				+2.8
2,355,262	+				+1.6
2,355,263	-				-4.4
2,355,263	-				+3.3
2,355,281	+				-2.3
2,355,281	+				-1.5
2,355,281	+				-1.0
2,355,281	+				-0.4
2,355,281	+				+2.3
2,355,282	-				-0.0
2,355,282	-				-0.0
2,355,282	-				-1.6
2,355,282	-				+3.0
2,355,282	-				+3.3
2,356,113	+		Psyr_2031	0.80	-1.0
2,356,113	+		Psyr_2031	0.80	+2.8
2,356,113	+		Psyr_2031	0.80	-1.1
2,356,113	+		Psyr_2031	0.80	+1.0
2,356,113	+		Psyr_2031	0.80	+1.6
2,356,114	-		Psyr_2031	0.80	+2.8
2,356,114	-		Psyr_2031	0.80	-1.7