Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1992

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,311,818	-				+2.3
2,311,818	-				+0.7
2,311,818	-				-3.5
2,311,818	-				-1.0
2,311,821	+				+2.0
2,311,821	+				+3.9
2,311,821	+				+1.6
2,311,821	+				-1.0
2,311,821	+				+0.3
2,311,821	+				+3.2
2,311,821	+				-0.4
2,311,821	+				-0.9
2,311,822	-				-0.4
2,311,822	-				+2.8
2,311,822	-				+0.1
2,311,822	-				-1.3
2,311,822	-				+1.6
2,311,822	-				+2.0
2,311,822	-				-1.3
2,311,822	-				-1.5
2,311,822	-				-1.6
2,311,822	-				-2.5
2,311,822	-				-1.4
2,311,822	-				-1.1
2,311,825	+				+0.3
2,311,825	+				-1.7
2,311,825	+				+3.2
2,311,857	+				+4.2
2,311,857	+				-0.0
2,311,857	+				+0.1
2,311,857	+				+1.6
2,311,858	-				+3.8
2,311,858	-				+3.2
2,311,858	-				-1.6
2,311,858	-				-0.0
2,311,858	-				+3.0
2,311,858	-				-2.0
2,311,858	-				+3.2
2,311,984	-				-1.8
2,312,136	+		Psyr_1991	0.20	+2.6
2,312,281	+		Psyr_1991	0.37	+3.4
2,312,578	+		Psyr_1991	0.74	+2.3
2,312,578	+		Psyr_1991	0.74	+1.3
2,312,578	+		Psyr_1991	0.74	-0.7
2,312,578	+		Psyr_1991	0.74	+3.2
2,312,578	+		Psyr_1991	0.74	+2.6
2,312,578	+		Psyr_1991	0.74	+0.2
2,312,578	+		Psyr_1991	0.74	-1.0
2,312,579	-		Psyr_1991	0.74	-1.9
2,312,579	-		Psyr_1991	0.74	-2.6
2,312,579	-		Psyr_1991	0.74	-0.3
2,312,579	-		Psyr_1991	0.74	-0.0
2,312,579	-		Psyr_1991	0.74	-0.0
2,312,579	-		Psyr_1991	0.74	+1.6
2,312,579	-		Psyr_1991	0.74	-2.0
2,312,582	+		Psyr_1991	0.75	+3.2
2,312,582	+		Psyr_1991	0.75	-2.1
2,312,582	+		Psyr_1991	0.75	-0.0
2,312,582	+		Psyr_1991	0.75	+2.8
2,312,582	+		Psyr_1991	0.75	+1.0
2,312,582	+		Psyr_1991	0.75	-0.1
2,312,582	+		Psyr_1991	0.75	-0.1
2,312,582	+		Psyr_1991	0.75	+2.4
2,312,582	+		Psyr_1991	0.75	+1.6
2,312,582	+		Psyr_1991	0.75	+0.2
2,312,582	+		Psyr_1991	0.75	+1.6
2,312,583	-		Psyr_1991	0.75	-0.0
2,312,583	-		Psyr_1991	0.75	-3.2
2,312,583	-		Psyr_1991	0.75	+1.6
2,312,583	-		Psyr_1991	0.75	-0.0
2,312,583	-		Psyr_1991	0.75	-0.0
2,312,583	-		Psyr_1991	0.75	+2.3
2,312,704	+		Psyr_1991	0.90	-0.8
2,312,704	+		Psyr_1991	0.90	-0.0
2,312,705	-		Psyr_1991	0.90	-1.7
2,312,705	-		Psyr_1991	0.90	-1.7
2,312,867	-				+3.4
2,313,359	-		Psyr_1992	0.53	+4.1
2,313,506	-		Psyr_1992	0.67	+3.0
2,313,616	+		Psyr_1992	0.78	-0.1
2,313,847	+				-0.8
2,313,847	+				+2.3
2,313,847	+				+3.3
2,313,847	+				-2.8
2,313,847	+				+3.6
2,313,847	+				+2.3
2,313,847	+				-2.3
2,313,847	+				+2.6
2,313,847	+				+3.0
2,313,848	-				-3.2
2,313,848	-				-3.7
2,313,848	-				+1.0
2,313,848	-				+3.0
2,313,848	-				-0.6
2,313,945	-				-2.0
2,313,998	+				+3.3
2,314,038	+				+0.1
2,314,039	-				+0.6
2,314,155	-		Psyr_1993	0.14	-0.3
2,314,155	-		Psyr_1993	0.14	-0.4
2,314,178	+		Psyr_1993	0.16	-3.9
2,314,178	+		Psyr_1993	0.16	-0.7
2,314,179	-		Psyr_1993	0.17	+2.6
2,314,179	-		Psyr_1993	0.17	-0.0
2,314,237	+		Psyr_1993	0.23	-1.8
2,314,238	-		Psyr_1993	0.23	-2.6
2,314,262	+		Psyr_1993	0.26	+1.0
2,314,262	+		Psyr_1993	0.26	+2.0
2,314,548	-		Psyr_1993	0.58	+2.3
2,314,637	+		Psyr_1993	0.68	+2.6
2,314,637	+		Psyr_1993	0.68	-3.3
2,314,652	+		Psyr_1993	0.69	+2.6
2,314,652	+		Psyr_1993	0.69	-1.0
2,314,652	+		Psyr_1993	0.69	+1.6
2,314,653	-		Psyr_1993	0.70	+0.6
2,314,653	-		Psyr_1993	0.70	-0.8
2,314,653	-		Psyr_1993	0.70	+2.6
2,314,757	+		Psyr_1993	0.81	-1.6
2,314,757	+		Psyr_1993	0.81	-0.9