Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1982

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,300,884	+		Psyr_1981	0.65	-0.5
2,300,884	+		Psyr_1981	0.65	+3.8
2,300,886	+		Psyr_1981	0.65	-0.0
2,300,887	-		Psyr_1981	0.66	-3.3
2,300,887	-		Psyr_1981	0.66	-3.1
2,301,021	+		Psyr_1981	0.72	-2.0
2,301,021	+		Psyr_1981	0.72	+2.6
2,301,021	+		Psyr_1981	0.72	-2.1
2,301,086	+		Psyr_1981	0.75	+1.0
2,301,305	+		Psyr_1981	0.85	+3.2
2,301,350	+		Psyr_1981	0.87	+3.0
2,301,351	-		Psyr_1981	0.87	-1.8
2,301,351	-		Psyr_1981	0.87	+0.2
2,301,704	-				-0.1
2,301,782	+				-0.0
2,301,783	-				+0.6
2,301,783	-				-0.8
2,301,787	+				+3.4
2,301,788	-				-1.8
2,301,788	-				+2.3
2,301,788	-				-4.7
2,301,805	+		Psyr_1982	0.11	+1.1
2,301,906	+		Psyr_1982	0.23	-1.8
2,301,906	+		Psyr_1982	0.23	-1.3
2,301,906	+		Psyr_1982	0.23	-1.2
2,301,907	-		Psyr_1982	0.23	+0.1
2,301,908	+		Psyr_1982	0.23	-4.0
2,301,908	+		Psyr_1982	0.23	-2.6
2,301,908	+		Psyr_1982	0.23	+3.3
2,301,908	+		Psyr_1982	0.23	-0.2
2,301,908	+		Psyr_1982	0.23	+4.2
2,301,908	+		Psyr_1982	0.23	+1.0
2,301,908	+		Psyr_1982	0.23	+4.1
2,301,908	+		Psyr_1982	0.23	-1.8
2,301,908	+		Psyr_1982	0.23	-2.7
2,301,908	+		Psyr_1982	0.23	-0.6
2,301,908	+		Psyr_1982	0.23	+4.7
2,301,909	-		Psyr_1982	0.23	-0.0
2,301,909	-		Psyr_1982	0.23	+0.3
2,301,909	-		Psyr_1982	0.23	-0.0
2,301,909	-		Psyr_1982	0.23	+3.0
2,301,909	-		Psyr_1982	0.23	+2.6
2,301,909	-		Psyr_1982	0.23	-1.3
2,301,909	-		Psyr_1982	0.23	-0.0
2,301,909	-		Psyr_1982	0.23	-0.0
2,301,909	-		Psyr_1982	0.23	+4.4
2,301,909	-		Psyr_1982	0.23	-2.2
2,301,909	-		Psyr_1982	0.23	-0.2
2,301,909	-		Psyr_1982	0.23	-3.5
2,301,909	-		Psyr_1982	0.23	+0.7
2,301,909	-		Psyr_1982	0.23	-2.3
2,301,909	-		Psyr_1982	0.23	-3.6
2,301,909	-		Psyr_1982	0.23	-1.4
2,301,979	-		Psyr_1982	0.31	+0.2
2,302,021	-		Psyr_1982	0.36	-1.2
2,302,140	+		Psyr_1982	0.50	+1.0
2,302,140	+		Psyr_1982	0.50	-0.9
2,302,141	-		Psyr_1982	0.50	-1.4
2,302,252	+		Psyr_1982	0.63	+0.3
2,302,252	+		Psyr_1982	0.63	+2.0
2,302,373	+		Psyr_1982	0.76	-1.2
2,302,374	-		Psyr_1982	0.77	-0.0
2,302,638	+				-1.8
2,302,639	-				-0.0
2,302,694	+				+0.1
2,302,695	-				+2.3
2,302,695	-				-0.7
2,302,695	-				+3.2
2,302,716	+				+3.2
2,302,802	+				-0.8
2,302,802	+				+1.4
2,302,802	+				-0.6
2,302,802	+				-1.7
2,302,802	+				-1.7
2,302,802	+				-1.4
2,302,803	-				-0.0
2,302,803	-				+0.5
2,302,816	+				-3.2
2,302,816	+				-0.1
2,302,816	+				+2.6
2,302,817	-				+0.4
2,302,817	-				+2.0
2,302,817	-				-1.7
2,302,817	-				+2.6
2,303,135	-		Psyr_1983	0.29	+1.1
2,303,462	+		Psyr_1983	0.52	-0.8
2,303,462	+		Psyr_1983	0.52	+3.0