Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1963

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,272,796	+		Psyr_1962	0.77	+2.0
2,272,796	+		Psyr_1962	0.77	-2.5
2,272,796	+		Psyr_1962	0.77	+1.6
2,272,797	-		Psyr_1962	0.77	-1.4
2,272,901	+		Psyr_1962	0.82	-1.8
2,273,115	-				-0.9
2,273,414	+				+3.7
2,273,707	+				-0.8
2,273,782	+				-0.0
2,273,782	+				-2.0
2,274,023	-		Psyr_1963	0.24	-0.7
2,274,023	-		Psyr_1963	0.24	+0.2
2,274,025	+		Psyr_1963	0.24	-1.6
2,274,125	-		Psyr_1963	0.30	-1.1
2,274,152	+		Psyr_1963	0.32	-1.0
2,274,153	-		Psyr_1963	0.32	-3.0
2,274,266	-		Psyr_1963	0.39	-3.7
2,274,448	+		Psyr_1963	0.50	-2.7
2,274,448	+		Psyr_1963	0.50	+3.2
2,274,448	+		Psyr_1963	0.50	-2.0
2,274,448	+		Psyr_1963	0.50	+1.6
2,274,449	-		Psyr_1963	0.50	-0.3
2,274,449	-		Psyr_1963	0.50	-3.0
2,274,449	-		Psyr_1963	0.50	+3.3
2,274,848	-		Psyr_1963	0.73	-1.8
2,275,048	+		Psyr_1963	0.85	+3.2
2,275,048	+		Psyr_1963	0.85	+3.3
2,275,048	+		Psyr_1963	0.85	+3.4
2,275,049	-		Psyr_1963	0.85	-1.9
2,275,351	-				-0.9
2,275,351	-				+0.6
2,275,401	+				+0.3
2,275,534	+		Psyr_1964	0.20	+3.2
2,275,534	+		Psyr_1964	0.20	+2.3
2,275,534	+		Psyr_1964	0.20	+2.0
2,275,535	-		Psyr_1964	0.20	-1.1
2,275,567	+		Psyr_1964	0.24	+2.8
2,275,588	+		Psyr_1964	0.26	-1.0
2,275,589	-		Psyr_1964	0.27	+1.6
2,275,612	+		Psyr_1964	0.29	-0.0
2,275,634	-		Psyr_1964	0.32	+1.6
2,275,684	+		Psyr_1964	0.37	-1.8
2,275,774	+		Psyr_1964	0.48	+2.6
2,275,810	+		Psyr_1964	0.52	-2.0
2,275,810	+		Psyr_1964	0.52	-2.8
2,275,811	-		Psyr_1964	0.52	+3.2
2,275,811	-		Psyr_1964	0.52	-1.2
2,275,945	+		Psyr_1964	0.68	-1.0
2,275,946	-		Psyr_1964	0.68	+2.0
2,275,946	-		Psyr_1964	0.68	+1.0
2,275,946	-		Psyr_1964	0.68	-0.2
2,275,946	-		Psyr_1964	0.68	+2.8
2,276,178	+				-1.4
2,276,178	+				+1.5