Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1916

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,189,855	+		Psyr_1915	0.48	+2.8
2,189,855	+		Psyr_1915	0.48	-1.8
2,189,855	+		Psyr_1915	0.48	-0.7
2,189,855	+		Psyr_1915	0.48	+3.9
2,189,856	-		Psyr_1915	0.48	-0.3
2,189,856	-		Psyr_1915	0.48	+2.0
2,190,132	-		Psyr_1915	0.70	+1.6
2,190,356	+		Psyr_1915	0.87	-2.1
2,190,362	+		Psyr_1915	0.87	-1.8
2,190,362	+		Psyr_1915	0.87	+3.2
2,190,362	+		Psyr_1915	0.87	-1.7
2,190,362	+		Psyr_1915	0.87	-2.3
2,190,363	-		Psyr_1915	0.87	-1.3
2,190,440	+				-2.0
2,190,440	+				-2.3
2,190,440	+				+2.8
2,190,440	+				+1.0
2,190,440	+				-3.0
2,190,440	+				+1.0
2,190,440	+				+3.0
2,190,441	-				-1.2
2,190,441	-				-1.1
2,190,441	-				+1.0
2,190,441	-				+3.9
2,190,441	-				-0.7
2,190,441	-				+2.0
2,190,441	-				+2.3
2,190,441	-				+4.1
2,190,441	-				-1.1
2,190,441	-				+0.0
2,190,493	+				+3.4
2,190,585	-				+3.3
2,190,585	-				+0.0
2,190,585	-				+2.3
2,190,629	+				+0.0
2,190,632	-				+0.0
2,190,672	+				+1.0
2,190,673	-				-1.1
2,190,719	+		Psyr_1916	0.12	+1.0
2,190,834	+		Psyr_1916	0.38	+0.0
2,190,834	+		Psyr_1916	0.38	+1.4
2,190,834	+		Psyr_1916	0.38	-0.2
2,190,834	+		Psyr_1916	0.38	-1.0
2,190,835	-		Psyr_1916	0.39	+2.8
2,190,835	-		Psyr_1916	0.39	+2.0
2,190,835	-		Psyr_1916	0.39	-3.7
2,190,835	-		Psyr_1916	0.39	+2.6
2,191,054	+		Psyr_1916	0.88	-1.3
2,191,054	+		Psyr_1916	0.88	+1.0
2,191,054	+		Psyr_1916	0.88	-0.2
2,191,055	-		Psyr_1916	0.88	+0.0
2,191,055	-		Psyr_1916	0.88	-1.9
2,191,055	-		Psyr_1916	0.88	+1.6
2,191,055	-		Psyr_1916	0.88	+3.7
2,191,055	-		Psyr_1916	0.88	+0.7
2,191,055	-		Psyr_1916	0.88	+3.2
2,191,055	-		Psyr_1916	0.88	-1.8
2,191,168	+				-3.0
2,191,315	+		Psyr_1917	0.54	+0.0
2,191,315	+		Psyr_1917	0.54	+0.2
2,191,315	+		Psyr_1917	0.54	+2.0
2,191,315	+		Psyr_1917	0.54	+2.3
2,191,316	-		Psyr_1917	0.54	+0.2
2,191,316	-		Psyr_1917	0.54	+0.0
2,191,372	+		Psyr_1917	0.78	-1.2
2,191,372	+		Psyr_1917	0.78	-0.7
2,191,372	+		Psyr_1917	0.78	+2.8
2,191,372	+		Psyr_1917	0.78	-3.4
2,191,373	-		Psyr_1917	0.78	-3.1
2,191,373	-		Psyr_1917	0.78	-0.9
2,191,373	-		Psyr_1917	0.78	-0.3
2,191,373	-		Psyr_1917	0.78	-2.3
2,191,373	-		Psyr_1917	0.78	-1.2
2,191,373	-		Psyr_1917	0.78	+0.6
2,191,442	+				+1.0
2,191,443	-				+0.9
2,191,443	-				+0.0
2,191,443	-				-1.5
2,191,475	+				+3.7
2,191,475	+				+2.0
2,191,475	+				+3.5
2,191,475	+				-4.0
2,191,475	+				-0.7
2,191,475	+				+1.6
2,191,476	-				+0.0
2,191,476	-				-0.4
2,191,476	-				+2.3
2,191,476	-				+3.8
2,191,476	-				+2.6
2,191,476	-				-2.5
2,191,476	-				+0.5
2,191,500	+				+1.0
2,191,500	+				-0.3
2,191,515	-				-2.0
2,191,951	-		Psyr_1918	0.35	-0.3
2,191,972	+		Psyr_1918	0.37	+2.6
2,191,982	+		Psyr_1918	0.38	-0.7
2,191,982	+		Psyr_1918	0.38	+2.0
2,191,982	+		Psyr_1918	0.38	+0.4
2,191,983	-		Psyr_1918	0.38	-1.7
2,191,983	-		Psyr_1918	0.38	-1.7
2,191,983	-		Psyr_1918	0.38	-1.2
2,191,983	-		Psyr_1918	0.38	-1.6
2,191,985	-		Psyr_1918	0.38	-1.2