Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1848

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,125,603	-				+1.6
2,125,614	+				+1.5
2,125,615	-				+0.8
2,125,703	-				-0.6
2,125,751	+				+3.0
2,125,751	+				+2.8
2,125,751	+				-1.4
2,125,751	+				-1.2
2,125,751	+				+0.5
2,125,751	+				+3.6
2,125,752	-				-1.2
2,125,752	-				+4.2
2,125,941	+				+2.8
2,125,983	+				+3.6
2,125,983	+				+2.8
2,125,984	-				-4.5
2,125,984	-				-1.9
2,126,135	+		Psyr_1847	0.35	+2.3
2,126,135	+		Psyr_1847	0.35	+3.0
2,126,575	+		Psyr_1848	0.10	+1.0
2,126,575	+		Psyr_1848	0.10	+1.6
2,126,575	+		Psyr_1848	0.10	-2.9
2,126,576	-		Psyr_1848	0.10	-3.4
2,126,576	-		Psyr_1848	0.10	+2.0
2,126,634	+		Psyr_1848	0.29	-2.4
2,126,634	+		Psyr_1848	0.29	+0.2
2,126,634	+		Psyr_1848	0.29	+3.2
2,126,634	+		Psyr_1848	0.29	+3.9
2,126,635	-		Psyr_1848	0.29	+2.0
2,126,635	-		Psyr_1848	0.29	+4.1
2,126,635	-		Psyr_1848	0.29	-1.4
2,126,635	-		Psyr_1848	0.29	+1.7
2,126,635	-		Psyr_1848	0.29	+3.0
2,126,635	-		Psyr_1848	0.29	+4.0
2,126,635	-		Psyr_1848	0.29	+0.3
2,126,878	+				+4.5
2,126,879	-				-0.6
2,127,164	-		Psyr_1849	0.26	+3.9
2,127,194	+		Psyr_1849	0.31	-1.9