Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1824

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,103,967	+		Psyr_1823	0.47	+2.8
2,103,968	-		Psyr_1823	0.47	+3.8
2,103,968	-		Psyr_1823	0.47	+2.0
2,103,968	-		Psyr_1823	0.47	-1.5
2,104,244	-		Psyr_1823	0.64	-1.7
2,104,258	+		Psyr_1823	0.64	-3.2
2,104,259	-		Psyr_1823	0.65	+2.3
2,104,259	-		Psyr_1823	0.65	+2.0
2,104,259	-		Psyr_1823	0.65	+3.8
2,104,642	+		Psyr_1823	0.87	-0.2
2,104,643	-		Psyr_1823	0.87	+2.0
2,104,753	+				+3.5
2,104,753	+				-2.2
2,104,753	+				+2.8
2,104,865	-				+3.3
2,104,918	+				-1.5
2,104,918	+				-1.0
2,104,918	+				+0.0
2,104,919	-				+0.8
2,104,927	-				+3.0
2,104,972	+				+1.0
2,104,972	+				-0.4
2,104,972	+				+2.0
2,104,972	+				-3.8
2,104,972	+				+4.1
2,104,973	-				+2.8
2,104,973	-				-1.9
2,105,174	-		Psyr_1824	0.28	-2.6
2,105,174	-		Psyr_1824	0.28	+0.0
2,105,174	-		Psyr_1824	0.28	-3.0
2,105,174	-		Psyr_1824	0.28	-1.2
2,105,174	-		Psyr_1824	0.28	+1.6
2,105,282	-		Psyr_1824	0.42	+1.0
2,105,398	+		Psyr_1824	0.56	-0.9
2,105,399	-		Psyr_1824	0.56	-1.4
2,105,438	-		Psyr_1824	0.61	+0.0
2,105,438	-		Psyr_1824	0.61	+0.0
2,105,480	+		Psyr_1824	0.67	-1.4
2,105,670	+				-4.6
2,105,671	-				-1.7
2,105,724	-				+1.3
2,105,756	-				-2.7
2,105,756	-				-0.2
2,105,765	-				+3.8