Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1815

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,088,958	+		Psyr_1814	0.63	+0.0
2,088,958	+		Psyr_1814	0.63	+1.6
2,088,958	+		Psyr_1814	0.63	-0.7
2,088,958	+		Psyr_1814	0.63	+2.3
2,088,958	+		Psyr_1814	0.63	-2.9
2,088,958	+		Psyr_1814	0.63	+1.6
2,088,959	-		Psyr_1814	0.63	+4.5
2,088,959	-		Psyr_1814	0.63	-1.2
2,088,959	-		Psyr_1814	0.63	+4.0
2,088,959	-		Psyr_1814	0.63	-0.8
2,088,959	-		Psyr_1814	0.63	-1.3
2,088,959	-		Psyr_1814	0.63	+0.6
2,088,999	-		Psyr_1814	0.65	-1.9
2,089,007	+		Psyr_1814	0.65	-2.6
2,089,008	-		Psyr_1814	0.65	-2.4
2,089,288	+		Psyr_1814	0.76	+1.6
2,089,288	+		Psyr_1814	0.76	-2.2
2,089,618	-		Psyr_1814	0.89	-2.2
2,089,642	+				-0.4
2,089,642	+				+1.2
2,089,643	-				+0.0
2,089,718	+				+2.6
2,089,718	+				+4.1
2,089,718	+				-1.0
2,089,760	+				-0.4
2,089,760	+				+0.0
2,089,890	+				+0.5
2,089,890	+				-0.8
2,089,890	+				-1.0
2,089,891	-				+0.0
2,089,891	-				+2.0
2,089,925	+				-1.2
2,089,938	+				+4.0
2,089,938	+				+0.5
2,089,939	-				-0.8
2,090,221	+		Psyr_1815	0.23	-0.9
2,090,222	-		Psyr_1815	0.23	-1.3
2,090,222	-		Psyr_1815	0.23	+1.6
2,090,223	+		Psyr_1815	0.23	-2.1
2,090,307	+		Psyr_1815	0.29	+3.8
2,090,307	+		Psyr_1815	0.29	-1.0
2,090,307	+		Psyr_1815	0.29	+3.3
2,090,307	+		Psyr_1815	0.29	-0.2
2,090,320	-		Psyr_1815	0.30	-1.2
2,090,523	+		Psyr_1815	0.44	+0.6
2,090,523	+		Psyr_1815	0.44	-1.3
2,090,523	+		Psyr_1815	0.44	+3.7
2,090,523	+		Psyr_1815	0.44	+1.6
2,090,524	-		Psyr_1815	0.44	+0.6
2,090,524	-		Psyr_1815	0.44	-0.9
2,090,610	+		Psyr_1815	0.50	+3.2
2,090,610	+		Psyr_1815	0.50	-0.4
2,090,703	+		Psyr_1815	0.56	+3.2
2,090,704	-		Psyr_1815	0.56	+0.5
2,090,878	+		Psyr_1815	0.68	-0.4
2,091,264	+				-1.5
2,091,264	+				+3.0
2,091,264	+				-4.6
2,091,265	-				+3.8
2,091,265	-				-3.1
2,091,308	+				-0.3
2,091,385	-				+1.0
2,091,567	+				-1.2
2,091,567	+				+4.1
2,091,567	+				-2.4
2,091,568	-				+2.6
2,091,769	+		Psyr_1816	0.23	-1.8
2,091,854	+		Psyr_1816	0.36	+1.0
2,091,882	+		Psyr_1816	0.40	+1.6
2,091,882	+		Psyr_1816	0.40	+2.0
2,091,882	+		Psyr_1816	0.40	+2.3
2,091,883	-		Psyr_1816	0.41	+1.0
2,091,952	+		Psyr_1816	0.51	+2.0
2,091,952	+		Psyr_1816	0.51	+3.3
2,092,104	+		Psyr_1816	0.74	+0.9
2,092,104	+		Psyr_1816	0.74	+0.3
2,092,105	-		Psyr_1816	0.74	+1.0
2,092,105	-		Psyr_1816	0.74	+1.0
2,092,146	+		Psyr_1816	0.80	-1.4
2,092,193	+		Psyr_1816	0.88	+3.6
2,092,224	+				-0.6
2,092,225	-				+2.3