Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1809

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,081,767	+		Psyr_1808	0.21	+2.6
2,081,767	+		Psyr_1808	0.21	-0.8
2,081,767	+		Psyr_1808	0.21	-0.4
2,081,767	+		Psyr_1808	0.21	-0.8
2,081,767	+		Psyr_1808	0.21	+1.6
2,081,768	-		Psyr_1808	0.22	+1.9
2,081,823	+		Psyr_1808	0.32	-0.7
2,081,823	+		Psyr_1808	0.32	+0.0
2,081,824	-		Psyr_1808	0.32	+1.0
2,081,824	-		Psyr_1808	0.32	+1.1
2,081,824	-		Psyr_1808	0.32	+4.4
2,081,824	-				+0.0
2,081,824	-		Psyr_1808	0.32	+4.2
2,082,099	+		Psyr_1808	0.86	+3.5
2,082,099	+		Psyr_1808	0.86	+2.0
2,082,099	+		Psyr_1808	0.86	-0.3
2,082,099	+		Psyr_1808	0.86	+2.0
2,082,099	+		Psyr_1808	0.86	+2.3
2,082,099	+		Psyr_1808	0.86	+2.6
2,082,099	+		Psyr_1808	0.86	+2.3
2,082,100	-		Psyr_1808	0.86	-1.4
2,082,100	-		Psyr_1808	0.86	+2.0
2,082,100	-		Psyr_1808	0.86	+2.0
2,082,100	-		Psyr_1808	0.86	-1.0
2,082,100	-		Psyr_1808	0.86	+2.6
2,082,100	-		Psyr_1808	0.86	-1.5
2,082,368	+		Psyr_1809	0.21	-0.7
2,082,396	-		Psyr_1809	0.24	-0.8
2,082,533	+		Psyr_1809	0.39	-0.9
2,082,533	+		Psyr_1809	0.39	+0.6
2,082,533	+		Psyr_1809	0.39	+3.2
2,082,534	-		Psyr_1809	0.39	+4.3
2,082,534	-		Psyr_1809	0.39	-1.3
2,082,534	-		Psyr_1809	0.39	+1.7
2,082,701	+		Psyr_1809	0.57	+3.9
2,083,139	+				+2.3
2,083,139	+				+2.8
2,083,192	+				+1.6
2,083,192	+				-0.3
2,083,200	+				-1.1
2,083,221	+				-1.1
2,083,221	+				+2.6
2,083,222	-				-1.6
2,083,253	+				-0.7
2,083,287	+				-2.6
2,083,287	+				+2.0
2,083,288	-				+0.0
2,083,389	+				+0.0
2,083,390	-				+2.6
2,083,390	-				+0.1
2,083,396	+				+3.2
2,083,419	+				-1.3
2,083,420	-				+1.6
2,083,442	+				+0.9
2,083,442	+				+2.6
2,083,442	+				+0.0
2,083,519	+				-0.7
2,083,520	-				+0.0
2,083,520	-				+2.3
2,083,613	+		Psyr_1810	0.33	+2.3
2,083,705	-		Psyr_1810	0.59	+1.0
2,083,837	-				+2.3
2,083,837	-				-0.9
2,083,852	+				+4.6
2,083,852	+				+2.6
2,083,853	-				+1.6
2,083,853	-				+2.8
2,083,894	+				+0.5
2,083,915	+				+2.8
2,083,915	+				+0.0
2,083,916	-				+2.6
2,083,916	-				+4.8
2,083,916	-				+0.1
2,083,916	-				+3.3
2,083,916	-				-0.2
2,084,007	-				+3.6