Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1797

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,068,352	+		Psyr_1795	0.80	+0.2
2,068,352	+		Psyr_1795	0.80	+3.7
2,068,353	-		Psyr_1795	0.80	-1.0
2,068,467	+				+3.3
2,068,468	-				-2.8
2,068,468	-				+1.6
2,068,468	-				+3.6
2,068,592	+				-0.4
2,068,592	+				-0.5
2,068,592	+				+2.0
2,068,592	+				+1.0
2,068,593	-				+1.0
2,068,593	-				-0.6
2,068,593	-				-0.3
2,068,593	-				+3.8
2,068,593	-				-0.4
2,068,593	-				+3.7
2,068,593	-				+1.6
2,068,593	-				+0.0
2,068,593	-				+2.6
2,068,593	-				+0.0
2,068,594	+				+0.5
2,068,594	+				-1.5
2,068,594	+				+0.0
2,068,595	-				+3.3
2,068,953	+		Psyr_1796	0.74	-1.0
2,068,985	-		Psyr_1796	0.80	+3.9
2,068,985	-		Psyr_1796	0.80	-0.8
2,069,077	+				-2.2
2,069,078	-				+2.3
2,069,078	-				-0.6
2,069,078	-				-0.9
2,069,078	-				+4.4
2,069,129	+				-0.1
2,069,154	+				+0.7
2,069,155	-				-0.3
2,069,280	-				+0.4
2,069,280	-				-0.5
2,069,481	-		Psyr_1797	0.21	-4.2
2,069,481	-		Psyr_1797	0.21	+0.0
2,069,553	+		Psyr_1797	0.27	-1.6
2,069,554	-		Psyr_1797	0.27	+1.9
2,069,920	+		Psyr_1797	0.60	+1.6
2,069,920	+		Psyr_1797	0.60	-3.5
2,069,921	-		Psyr_1797	0.60	+3.7
2,069,921	-		Psyr_1797	0.60	+3.3
2,069,921	-		Psyr_1797	0.60	+3.0
2,070,114	+		Psyr_1797	0.77	+2.3
2,070,114	+		Psyr_1797	0.77	-1.8
2,070,114	+		Psyr_1797	0.77	+3.8
2,070,114	+		Psyr_1797	0.77	+4.6
2,070,114	+		Psyr_1797	0.77	-1.7
2,070,115	-		Psyr_1797	0.77	-1.5
2,070,115	-		Psyr_1797	0.77	-0.8
2,070,362	+				-1.4
2,070,484	+				-1.7
2,070,485	-				-1.9
2,070,489	-				+2.3
2,070,496	-				-1.1
2,070,517	+				-0.6
2,070,572	+				+0.2
2,070,572	+				-0.6
2,070,572	+				+0.3
2,070,573	-				-3.2
2,070,573	-				+2.3
2,070,573	-				-0.8
2,070,577	-				-0.9
2,070,638	+				-1.0
2,070,702	+				+2.8
2,070,838	+		Psyr_1798	0.15	-1.1
2,070,874	+		Psyr_1798	0.17	-0.6
2,071,249	+		Psyr_1798	0.35	+2.8
2,071,249	+		Psyr_1798	0.35	-2.0
2,071,249	+		Psyr_1798	0.35	+3.2
2,071,249	+		Psyr_1798	0.35	+0.4
2,071,249	+		Psyr_1798	0.35	+1.0
2,071,250	-		Psyr_1798	0.36	+0.2
2,071,250	-		Psyr_1798	0.36	+3.7
2,071,250	-		Psyr_1798	0.36	-3.3
2,071,250	-		Psyr_1798	0.36	-4.6
2,071,250	-		Psyr_1798	0.36	-1.6
2,071,250	-		Psyr_1798	0.36	-2.3
2,071,251	+		Psyr_1798	0.36	+3.2
2,071,354	+		Psyr_1798	0.41	-1.2
2,071,355	-		Psyr_1798	0.41	-0.7