Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1268

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
1,430,704	+		Psyr_1266	0.70	-3.4
1,430,876	+		Psyr_1266	0.82	-2.6
1,430,876	+		Psyr_1266	0.82	-2.8
1,430,876	+		Psyr_1266	0.82	+3.4
1,430,876	+		Psyr_1266	0.82	-1.1
1,430,876	+		Psyr_1266	0.82	-3.8
1,430,876	+		Psyr_1266	0.82	+3.3
1,430,876	+		Psyr_1266	0.82	+2.0
1,430,876	+		Psyr_1266	0.82	-1.9
1,430,876	+		Psyr_1266	0.82	+3.0
1,430,877	-		Psyr_1266	0.82	+2.0
1,430,877	-		Psyr_1266	0.82	-0.5
1,430,878	+		Psyr_1266	0.82	-2.0
1,430,878	+		Psyr_1266	0.82	+2.8
1,430,879	-		Psyr_1266	0.82	+3.4
1,430,879	-		Psyr_1266	0.82	-2.7
1,431,051	+				-1.4
1,431,051	+				+1.6
1,431,051	+				+1.4
1,431,051	+				+3.7
1,431,051	+				+1.0
1,431,051	+				-1.8
1,431,051	+				-0.5
1,431,052	-				-0.4
1,431,052	-				-1.2
1,431,052	-				+2.8
1,431,052	-				-0.1
1,431,052	-				+2.8
1,431,052	-				+2.0
1,431,628	+				-2.4
1,431,905	+		Psyr_1268	0.19	-0.0
1,431,974	-		Psyr_1268	0.23	-0.0
1,432,035	+		Psyr_1268	0.27	-3.8
1,432,035	+		Psyr_1268	0.27	-0.0
1,432,035	+		Psyr_1268	0.27	-2.8
1,432,039	+		Psyr_1268	0.28	-4.0
1,432,039	+		Psyr_1268	0.28	-5.7
1,432,039	+		Psyr_1268	0.28	+1.6
1,432,039	+		Psyr_1268	0.28	-0.0
1,432,040	-		Psyr_1268	0.28	-0.0
1,432,048	+		Psyr_1268	0.28	-3.2
1,432,048	+		Psyr_1268	0.28	-2.3
1,432,258	+		Psyr_1268	0.42	-0.0
1,432,297	+		Psyr_1268	0.45	-3.3
1,432,297	+		Psyr_1268	0.45	-1.8
1,432,310	-		Psyr_1268	0.46	-0.0
1,432,310	-		Psyr_1268	0.46	-4.4
1,432,310	-		Psyr_1268	0.46	-3.3
1,432,334	-		Psyr_1268	0.47	-4.0
1,432,334	-		Psyr_1268	0.47	-3.5
1,432,337	-		Psyr_1268	0.47	-4.5
1,432,473	+		Psyr_1268	0.57	-0.0
1,432,479	+		Psyr_1268	0.57	-0.0
1,432,479	+		Psyr_1268	0.57	-3.9
1,432,479	+		Psyr_1268	0.57	-2.8
1,432,479	+		Psyr_1268	0.57	-0.6
1,432,480	-		Psyr_1268	0.57	-2.6
1,432,480	-		Psyr_1268	0.57	-0.0
1,432,492	+		Psyr_1268	0.58	-0.0
1,432,493	-		Psyr_1268	0.58	-1.6
1,432,493	-		Psyr_1268	0.58	-4.1
1,432,753	+		Psyr_1268	0.75	-0.0
1,432,754	-		Psyr_1268	0.75	-4.0
1,432,963	+		Psyr_1268	0.89	-2.8
1,433,132	+				-4.0
1,433,132	+				-2.0
1,433,133	-				+1.7
1,433,133	-				+0.1
1,433,134	+				-0.7
1,433,134	+				-1.8
1,433,134	+				-0.5
1,433,135	-				-0.8
1,433,135	-				+2.8
1,433,158	-				-0.4
1,433,184	+				+3.8
1,433,284	-				-0.0
1,433,284	-				-0.0
1,433,670	+				-0.0
1,433,670	+				+0.7
1,433,670	+				+2.3
1,433,670	+				-2.8
1,433,671	-				+2.6
1,433,671	-				-2.0
1,433,671	-				-3.2
1,433,671	-				+1.0
1,433,671	-				+2.4
1,433,671	-				+3.0
1,433,671	-				-1.1
1,433,671	-				+2.0
1,433,671	-				+1.0
1,433,674	+				-2.0
1,433,674	+				-3.6
1,433,674	+				-2.3
1,433,674	+				+1.6
1,433,675	-				-2.0
1,433,675	-				-0.0
1,433,675	-				+1.6
1,433,675	-				+2.3
1,433,675	-				-1.7
1,433,675	-				+2.8
1,433,675	-				-4.1
1,433,895	+		Psyr_1269	0.14	+1.0
1,434,064	-		Psyr_1269	0.19	+2.6
1,434,064	-		Psyr_1269	0.19	-1.0
1,434,096	+		Psyr_1269	0.19	-0.3