Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0831

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
940,565	-				+1.7
940,565	-				+0.5
940,565	-				+1.1
940,565	-				-2.4
940,688	+				-2.7
940,689	-				+0.9
940,689	-				-0.3
940,695	+				+4.8
940,696	-				+1.7
940,711	+				-0.1
940,711	+				+0.1
940,712	-				-1.4
940,712	-				-1.6
940,712	-				-1.5
940,763	+				+3.6
940,763	+				+1.7
940,764	-				+3.6
940,802	+				-1.1
940,805	+				+0.1
940,806	-				+1.7
940,957	+				-1.4
940,957	+				+1.7
940,957	+				-4.4
940,957	+				+0.1
940,957	+				+1.1
940,957	+				+2.9
940,957	+				-1.1
940,957	+				+2.5
940,958	-				+1.1
940,958	-				+1.1
940,958	-				+1.1
940,963	+				+2.5
940,963	+				+0.1
940,964	-				-4.3
941,006	+				+0.7
941,006	+				-1.6
941,006	+				+1.1
941,006	+				+0.1
941,006	+				+2.9
941,006	+				+1.1
941,006	+				-1.1
941,006	+				-0.5
941,007	-				-1.4
941,007	-				-1.5
941,033	-				+2.1
941,033	-				-0.2
941,049	+				-0.4
941,049	+				+0.8
941,088	+				-0.6
941,089	-				+3.7
941,103	-				+3.3
941,124	-				+3.7
941,124	-				-1.4
941,132	+				-0.9
941,132	+				-1.6
941,132	+				-1.0
941,132	+				-1.5
941,132	+				+3.5
941,133	-				+0.6
941,133	-				-0.4
941,133	-				-2.4
941,135	-				-1.0
941,135	-				-0.4
941,135	-				+2.9
941,135	-				+1.7
941,234	+				-1.3
941,234	+				-1.2
941,270	-				+2.5
941,321	+				-2.1
941,321	+				-2.1
941,322	-				+1.7
941,322	-				+1.1
941,322	-				+3.3
941,322	-				+1.9
941,544	-		Psyr_0831	0.15	-3.4
941,657	-		Psyr_0831	0.23	+2.1
941,657	-		Psyr_0831	0.23	+0.1
941,676	-		Psyr_0831	0.24	+1.1
941,831	+		Psyr_0831	0.34	+1.7
941,831	+		Psyr_0831	0.34	-2.2
941,832	-		Psyr_0831	0.34	+0.1
942,903	+				+0.1
942,904	-				+2.1
943,170	+		Psyr_0832	0.13	+0.1
943,171	-		Psyr_0832	0.13	+0.1
943,178	+		Psyr_0832	0.14	-0.9
943,178	+		Psyr_0832	0.14	+0.1
943,179	-		Psyr_0832	0.14	+0.1
943,179	-		Psyr_0832	0.14	+3.3
943,216	+		Psyr_0832	0.15	-1.3
943,217	-		Psyr_0832	0.15	-3.0
943,424	-		Psyr_0832	0.22	+2.1