Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0822

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
928,682	+		Psyr_0821	0.66	+2.1
928,683	-		Psyr_0821	0.66	+2.1
928,683	-		Psyr_0821	0.66	-1.1
929,320	+		Psyr_0821	0.88	+2.9
929,320	+		Psyr_0821	0.88	+1.7
929,320	+		Psyr_0821	0.88	+2.1
929,320	+		Psyr_0821	0.88	+3.7
929,321	-		Psyr_0821	0.88	+3.1
929,321	-		Psyr_0821	0.88	+4.2
929,321	-		Psyr_0821	0.88	+0.6
929,321	-		Psyr_0821	0.88	+4.1
929,321	-		Psyr_0821	0.88	+0.0
929,321	-		Psyr_0821	0.88	+2.7
929,321	-		Psyr_0821	0.88	-2.6
929,321	-		Psyr_0821	0.88	-2.5
929,650	+				-0.9
929,650	+				-0.3
929,651	-				+3.9
929,782	+		Psyr_0822	0.14	-1.2
929,783	-		Psyr_0822	0.14	-2.1
930,524	+				+2.5
930,571	+				+0.2
930,572	-				-1.3
930,591	+				+0.1
930,591	+				+0.1
930,592	-				-0.9
930,592	-				+2.3
930,592	-				-2.3
930,619	+				+1.1
930,619	+				-0.5
930,619	+				+2.1
930,619	+				-1.3
930,619	+				-3.4
930,619	+				+1.1
930,619	+				-0.6
930,620	-				-0.3
930,620	-				+3.6
930,620	-				+2.9
930,620	-				-1.6
930,655	+				+1.1
931,003	+		Psyr_0823	0.23	+5.2
931,003	+		Psyr_0823	0.23	-2.1
931,004	-		Psyr_0823	0.23	+0.2
931,059	+		Psyr_0823	0.26	+2.1
931,059	+		Psyr_0823	0.26	+0.4
931,197	+		Psyr_0823	0.34	+2.7
931,198	-		Psyr_0823	0.34	+1.7
931,198	-		Psyr_0823	0.34	-2.4
931,326	+		Psyr_0823	0.41	+1.7
931,327	-		Psyr_0823	0.41	+3.5
931,577	+		Psyr_0823	0.56	+3.7