Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0278

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
294,976	-				-2.4
295,016	+				+1.8
295,016	+				+0.5
295,016	+				-1.4
295,016	+				-0.2
295,017	-				+3.6
295,017	-				+2.1
295,017	-				-1.2
295,213	+		Psyr_0277	0.27	-1.6
295,213	+		Psyr_0277	0.27	+0.6
295,213	+		Psyr_0277	0.27	+2.2
295,213	+		Psyr_0277	0.27	-1.0
295,213	+		Psyr_0277	0.27	+0.1
295,214	-		Psyr_0277	0.27	-0.7
295,460	+		Psyr_0277	0.58	+0.3
295,461	-		Psyr_0277	0.58	-2.2
295,480	+		Psyr_0277	0.61	+1.0
295,481	-		Psyr_0277	0.61	+3.4
295,681	+		Psyr_0277	0.86	+3.9
295,681	+		Psyr_0277	0.86	-2.1
295,681	+		Psyr_0277	0.86	-0.7
295,681	+		Psyr_0277	0.86	+1.8
295,681	+		Psyr_0277	0.86	-0.9
295,682	-		Psyr_0277	0.86	+4.9
295,682	-		Psyr_0277	0.86	-0.5
295,682	-		Psyr_0277	0.86	-0.3
295,682	-		Psyr_0277	0.86	-0.1
295,682	-		Psyr_0277	0.86	+3.5
295,682	-		Psyr_0277	0.86	-0.5
295,776	+				+0.7
295,776	+				+0.8
295,776	+				+0.0
295,777	-				+0.6
295,777	-				-0.9
295,794	+				-0.9
295,795	-				+3.4
295,795	-				+1.8
295,799	+				+1.2
295,799	+				-1.9
295,799	+				+3.2
295,800	-				-1.5
295,800	-				-2.4
295,800	-				-0.1
295,800	-				+3.6
295,800	-				-1.1
295,800	-				-0.9
295,800	-				+1.5
295,800	-				-0.3
295,800	-				-0.7
295,800	-				+1.8
295,877	+		Psyr_0278	0.12	+1.2
295,877	+		Psyr_0278	0.12	+3.0
295,878	-		Psyr_0278	0.12	-1.2
295,878	-		Psyr_0278	0.12	+0.2
295,878	-		Psyr_0278	0.12	-0.2
295,878	-		Psyr_0278	0.12	-1.8
296,278	+		Psyr_0278	0.63	-1.0
296,278	+		Psyr_0278	0.63	+1.8
296,278	+		Psyr_0278	0.63	+0.2
296,278	+		Psyr_0278	0.63	+3.5
296,278	+		Psyr_0278	0.63	-1.3
296,279	-		Psyr_0278	0.63	+4.3
296,279	-		Psyr_0278	0.63	+4.4
296,279	-		Psyr_0278	0.63	+0.6
296,356	+		Psyr_0278	0.73	+0.7
296,356	+		Psyr_0278	0.73	+0.3
296,356	+		Psyr_0278	0.73	+2.1
296,356	+		Psyr_0278	0.73	+4.4
296,357	-		Psyr_0278	0.73	+0.3
296,357	-		Psyr_0278	0.73	+2.5
296,466	+		Psyr_0278	0.87	+0.2
296,467	-		Psyr_0278	0.87	+0.3
296,506	+				+2.6
296,506	+				+0.8
296,506	+				+0.3
296,506	+				+0.3
296,506	+				-2.3
296,506	+				+3.2
296,507	-				+3.9
296,507	-				+3.6
296,507	-				-0.8
296,507	-				+1.8
296,507	-				-0.6
296,508	+				+4.0
296,508	+				-0.4
296,508	+				+0.2
296,508	+				-3.6
296,508	+				-0.5
296,509	-				+1.2
296,509	-				-1.2
296,568	-				-1.3
296,593	+				-0.8
296,594	-				-0.4
296,594	-				-0.5
296,594	-				+3.4
296,629	+				-2.9
296,630	-				-0.7
296,630	-				+0.2
296,630	-				-0.3
296,630	-				-0.1
296,851	+		Psyr_0279	0.34	-1.2
296,852	-		Psyr_0279	0.34	-1.2
296,852	-		Psyr_0279	0.34	-1.8
296,870	+		Psyr_0279	0.37	-1.6
296,870	+		Psyr_0279	0.37	-0.9
296,870	+		Psyr_0279	0.37	-0.6
296,870	+		Psyr_0279	0.37	-0.4
296,870	+		Psyr_0279	0.37	-1.0
296,870	+		Psyr_0279	0.37	-1.2
296,870	+		Psyr_0279	0.37	-0.3
296,871	-		Psyr_0279	0.37	+1.1
297,404	+				+1.2
297,404	+				-0.9
297,405	-				-0.8
297,405	-				+1.8
297,405	-				+0.2
297,405	-				+2.8
297,407	-				+3.5
297,464	+				-2.9
297,464	+				-1.1
297,464	+				-1.2
297,464	+				+3.4
297,464	+				+2.2
297,465	-				+4.4
297,465	-				+1.9
297,465	-				-0.3
297,465	-				+1.2
297,465	-				+3.6
297,465	-				-1.2