Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0141

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
151,585	+		Psyr_0140	0.23	+0.1
151,586	-		Psyr_0140	0.23	-1.2
151,636	+		Psyr_0140	0.28	-1.3
151,636	+		Psyr_0140	0.28	-1.4
151,637	-		Psyr_0140	0.28	-1.2
151,750	+		Psyr_0140	0.38	-1.0
151,900	+		Psyr_0140	0.52	-1.4
151,900	+		Psyr_0140	0.52	-2.0
151,900	+		Psyr_0140	0.52	-1.0
151,900	+		Psyr_0140	0.52	+1.0
151,900	+		Psyr_0140	0.52	+3.7
151,900	+		Psyr_0140	0.52	-1.7
151,901	-		Psyr_0140	0.52	+3.0
151,901	-		Psyr_0140	0.52	-0.3
151,978	+		Psyr_0140	0.60	-0.4
151,978	+		Psyr_0140	0.60	-0.6
151,978	+		Psyr_0140	0.60	-0.0
151,978	+		Psyr_0140	0.60	-3.9
151,979	-		Psyr_0140	0.60	+2.8
151,979	-		Psyr_0140	0.60	+0.4
152,083	+		Psyr_0140	0.69	-0.7
152,131	+		Psyr_0140	0.74	-2.1
152,256	+		Psyr_0140	0.86	+3.8
152,256	+		Psyr_0140	0.86	+3.7
152,257	-		Psyr_0140	0.86	-0.7
152,362	+				+2.8
152,363	-				+1.2
152,363	-				-1.2
152,574	+		Psyr_0141	0.16	+2.5
152,574	+		Psyr_0141	0.16	-0.8
152,574	+		Psyr_0141	0.16	+2.5
152,574	+		Psyr_0141	0.16	+1.4
152,574	+		Psyr_0141	0.16	+2.8
152,574	+		Psyr_0141	0.16	+0.7
152,574	+		Psyr_0141	0.16	-2.1
152,574	+		Psyr_0141	0.16	-0.6
152,575	-		Psyr_0141	0.16	+3.5
152,575	-		Psyr_0141	0.16	-1.1
152,575	-		Psyr_0141	0.16	+1.7
152,575	-		Psyr_0141	0.16	-1.1
152,575	-		Psyr_0141	0.16	-2.0
152,595	+		Psyr_0141	0.18	-1.0
152,595	+		Psyr_0141	0.18	-1.3
152,595	+		Psyr_0141	0.18	+4.4
152,595	+		Psyr_0141	0.18	-0.2
152,595	+		Psyr_0141	0.18	-1.4
152,595	+		Psyr_0141	0.18	+1.8
152,595	+		Psyr_0141	0.18	-0.7
152,595	+		Psyr_0141	0.18	-0.4
152,595	+		Psyr_0141	0.18	-1.6
152,596	-		Psyr_0141	0.18	-3.9
152,596	-		Psyr_0141	0.18	-0.8
152,596	-		Psyr_0141	0.18	-1.2
152,596	-		Psyr_0141	0.18	+2.2
152,596	-		Psyr_0141	0.18	-2.3
152,596	-		Psyr_0141	0.18	-0.1
152,596	-		Psyr_0141	0.18	+2.5
152,596	-		Psyr_0141	0.18	+0.2
152,596	-		Psyr_0141	0.18	+2.5
152,596	-		Psyr_0141	0.18	-1.8
152,596	-		Psyr_0141	0.18	-0.5
152,640	+		Psyr_0141	0.23	+4.5
152,641	-		Psyr_0141	0.23	+0.4
152,652	+		Psyr_0141	0.24	-0.6
152,652	+		Psyr_0141	0.24	-1.1
152,653	-		Psyr_0141	0.24	-2.4
152,653	-		Psyr_0141	0.24	-1.8
152,653	-		Psyr_0141	0.24	-1.8
152,653	-		Psyr_0141	0.24	-3.7
152,653	-		Psyr_0141	0.24	-2.7
152,716	-		Psyr_0141	0.30	+3.2
152,730	+		Psyr_0141	0.31	-0.3
152,730	+		Psyr_0141	0.31	-3.4
152,730	+		Psyr_0141	0.31	+0.5
152,730	+		Psyr_0141	0.31	+3.8
152,730	+		Psyr_0141	0.31	+4.6
152,730	+		Psyr_0141	0.31	+1.2
152,730	+		Psyr_0141	0.31	-0.0
152,731	-		Psyr_0141	0.31	-1.6
152,911	-		Psyr_0141	0.49	-0.4
152,979	+		Psyr_0141	0.56	-0.1
152,979	+		Psyr_0141	0.56	-0.6
152,980	-		Psyr_0141	0.56	-1.3
152,980	-		Psyr_0141	0.56	-2.1
153,111	+		Psyr_0141	0.69	-2.3
153,111	+		Psyr_0141	0.69	+2.5
153,112	-		Psyr_0141	0.69	-1.9
153,112	-		Psyr_0141	0.69	+1.2
153,112	-		Psyr_0141	0.69	+5.2
153,112	-		Psyr_0141	0.69	-0.5
153,112	-		Psyr_0141	0.69	-0.6
153,112	-		Psyr_0141	0.69	-2.0
153,201	+		Psyr_0141	0.77	-1.5
153,201	+		Psyr_0141	0.77	-2.7
153,201	+		Psyr_0141	0.77	+4.7
153,202	-		Psyr_0141	0.78	+0.2
153,202	-		Psyr_0141	0.78	-1.1
154,171	+		Psyr_0142	0.47	+0.7