Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0135

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
143,403	-				-1.3
143,437	+				-1.5
143,437	+				-1.2
143,438	-				-0.4
143,532	+				+0.2
143,532	+				-1.1
143,532	+				+0.3
143,532	+				+3.7
143,532	+				-0.5
143,533	-				+1.2
143,533	-				+1.2
143,533	-				+2.8
143,533	-				+1.8
143,533	-				-0.4
143,533	-				+1.1
143,655	-				+0.9
143,681	+				+0.2
143,682	-				+3.2
143,682	-				-0.4
143,682	-				+4.5
143,753	+				-0.9
143,754	-				-1.1
143,754	-				+3.2
143,754	-				-1.3
143,754	-				+2.8
143,754	-				-1.5
143,775	+				-2.6
143,791	+				+0.3
143,791	+				+0.3
143,905	+				+3.2
143,906	-				+3.2
143,906	-				-1.2
144,055	+				+0.6
144,109	-				-1.4
144,109	-				-0.7
144,175	+				-0.6
144,175	+				+0.2
144,175	+				-2.3
144,175	+				-0.1
144,175	+				-2.5
144,175	+				+1.8
144,176	-				-1.0
144,176	-				-1.0
144,176	-				+1.4
144,176	-				+0.5
144,176	-				-3.0
144,176	-				-2.6
144,176	-				+3.0
144,208	-				+0.6
144,208	-				-0.1
144,217	+				-0.6
144,490	+		Psyr_0135	0.11	+0.0
144,525	+		Psyr_0135	0.15	+1.8
144,525	+		Psyr_0135	0.15	-0.4
144,526	-		Psyr_0135	0.15	+1.8
144,550	-		Psyr_0135	0.18	-0.9
144,553	+		Psyr_0135	0.18	-1.4
144,553	+		Psyr_0135	0.18	+2.5
144,553	+		Psyr_0135	0.18	-1.6
144,553	+		Psyr_0135	0.18	+0.6
144,553	+		Psyr_0135	0.18	+0.2
144,554	-		Psyr_0135	0.19	-3.7
144,554	-		Psyr_0135	0.19	+3.7
144,554	-		Psyr_0135	0.19	+1.2
144,554	-		Psyr_0135	0.19	+0.2
144,554	-		Psyr_0135	0.19	+1.8
144,554	-		Psyr_0135	0.19	+5.3
144,575	+		Psyr_0135	0.21	+2.5
144,576	-		Psyr_0135	0.21	-2.3
144,576	-		Psyr_0135	0.21	-3.7
144,576	-		Psyr_0135	0.21	-0.9
144,576	-		Psyr_0135	0.21	-2.3
144,993	-		Psyr_0135	0.72	-1.3
145,180	-				-0.4
145,255	-				-0.5
145,273	+				-0.0
145,273	+				+3.0
145,274	-				-0.8
145,343	+				+2.5
145,381	+		Psyr_0136	0.14	+2.5
145,382	-		Psyr_0136	0.15	+2.8
145,382	-		Psyr_0136	0.15	-1.5
145,382	-		Psyr_0136	0.15	-4.4
145,382	-		Psyr_0136	0.15	-1.2
145,382	-		Psyr_0136	0.15	+3.7
145,382	-		Psyr_0136	0.15	-1.4
145,472	-		Psyr_0136	0.27	+0.2
145,491	+		Psyr_0136	0.30	-2.1
145,607	+		Psyr_0136	0.46	+2.8
145,607	+		Psyr_0136	0.46	-1.2
145,608	-		Psyr_0136	0.46	-3.7
145,834	+		Psyr_0136	0.78	+3.2
145,834	+		Psyr_0136	0.78	-1.0
145,835	-		Psyr_0136	0.79	+4.3
145,835	-		Psyr_0136	0.79	+0.6
145,835	-		Psyr_0136	0.79	-0.0
145,984	+				-1.0
145,984	+				+1.6
145,985	-				+1.3
146,199	+		Psyr_0137	0.53	+0.6
146,199	+		Psyr_0137	0.53	-0.4