Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_927

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,052,506	+		Pf1N1B4_926	0.56	+0.4
1,052,506	+				+1.8
1,052,506	+		Pf1N1B4_926	0.56	+0.2
1,052,507	-		Pf1N1B4_926	0.56	-1.7
1,052,696	+		Pf1N1B4_926	0.68	-1.2
1,052,696	+		Pf1N1B4_926	0.68	-0.5
1,052,696	+		Pf1N1B4_926	0.68	-1.2
1,052,697	-		Pf1N1B4_926	0.68	+0.7
1,052,697	-		Pf1N1B4_926	0.68	-0.5
1,052,697	-		Pf1N1B4_926	0.68	-0.1
1,052,697	-		Pf1N1B4_926	0.68	-0.9
1,052,855	+		Pf1N1B4_926	0.78	+0.1
1,052,855	+		Pf1N1B4_926	0.78	-0.2
1,052,855	+		Pf1N1B4_926	0.78	+1.1
1,052,856	-		Pf1N1B4_926	0.78	+0.1
1,052,856	-		Pf1N1B4_926	0.78	+0.4
1,053,036	+		Pf1N1B4_926	0.90	+0.6
1,053,037	-		Pf1N1B4_926	0.90	-1.8
1,053,037	-		Pf1N1B4_926	0.90	-0.9
1,053,071	+				+1.1
1,053,115	+				-0.5
1,053,115	+				+0.8
1,053,116	-				-0.5
1,053,116	-				-0.5
1,053,116	-				-0.7
1,053,194	+				-0.5
1,053,195	-				-0.1
1,053,195	-				-0.7
1,053,275	+				-0.1
1,053,292	+				+0.2
1,053,293	-				-0.5
1,053,293	-				+1.1
1,053,293	-				+1.6
1,053,293	-				+0.3
1,053,295	+				+0.6
1,053,295	+				-0.3
1,053,296	-				+1.1
1,053,333	+				-0.2
1,053,386	+				-1.2
1,053,386	+				-0.8
1,053,386	+				-0.4
1,053,387	-				+1.7
1,053,387	-				+0.8
1,053,434	+				+0.3
1,053,435	-				+0.9
1,053,435	-				+0.6
1,053,435	-				-0.0
1,053,435	-				-0.2
1,053,435	-				-0.6
1,053,435	-				+0.7
1,053,710	+		Pf1N1B4_927	0.36	-0.7
1,053,756	+		Pf1N1B4_927	0.41	-0.5
1,053,756	+		Pf1N1B4_927	0.41	-1.9
1,053,756	+		Pf1N1B4_927	0.41	+0.2
1,053,757	-		Pf1N1B4_927	0.41	-1.2
1,053,757	-		Pf1N1B4_927	0.41	+1.0
1,053,757	-		Pf1N1B4_927	0.41	-1.7
1,053,757	-		Pf1N1B4_927	0.41	-0.2
1,053,757	-		Pf1N1B4_927	0.41	+2.4
1,053,757	-		Pf1N1B4_927	0.41	-0.5
1,053,757	-		Pf1N1B4_927	0.41	-0.9
1,053,757	-		Pf1N1B4_927	0.41	+0.8
1,053,757	-		Pf1N1B4_927	0.41	+1.5
1,054,103	+		Pf1N1B4_927	0.79	+0.1
1,054,104	-		Pf1N1B4_927	0.79	-1.9
1,054,137	+		Pf1N1B4_927	0.83	-0.2
1,054,137	+		Pf1N1B4_927	0.83	+0.8
1,054,137	+		Pf1N1B4_927	0.83	+0.3
1,054,137	+				+1.1
1,054,137	+		Pf1N1B4_927	0.83	+1.9
1,054,137	+		Pf1N1B4_927	0.83	+1.3
1,054,137	+		Pf1N1B4_927	0.83	+0.2
1,054,137	+		Pf1N1B4_927	0.83	+0.9
1,054,137	+		Pf1N1B4_927	0.83	+0.1
1,054,137	+		Pf1N1B4_927	0.83	+0.4
1,054,137	+		Pf1N1B4_927	0.83	+0.8
1,054,138	-		Pf1N1B4_927	0.83	+1.9
1,054,138	-		Pf1N1B4_927	0.83	-1.5
1,054,138	-				+0.1
1,054,138	-		Pf1N1B4_927	0.83	+0.6
1,054,138	-				-0.7
1,054,138	-		Pf1N1B4_927	0.83	+0.8
1,054,138	-		Pf1N1B4_927	0.83	-0.5
1,054,138	-		Pf1N1B4_927	0.83	-0.5
1,054,138	-		Pf1N1B4_927	0.83	-1.2
1,054,138	-				-0.9
1,054,500	+		Pf1N1B4_928	0.43	-1.2
1,054,575	+		Pf1N1B4_928	0.58	+0.7
1,054,575	+		Pf1N1B4_928	0.58	+1.1
1,054,575	+		Pf1N1B4_928	0.58	-1.6
1,054,575	+		Pf1N1B4_928	0.58	-2.2
1,054,576	-		Pf1N1B4_928	0.59	+0.9
1,054,576	-		Pf1N1B4_928	0.59	-0.2
1,054,576	-		Pf1N1B4_928	0.59	+0.4
1,054,576	-		Pf1N1B4_928	0.59	+0.1
1,054,576	-		Pf1N1B4_928	0.59	+0.4
1,054,639	+		Pf1N1B4_928	0.72	+1.1
1,054,640	-		Pf1N1B4_928	0.72	-3.1
1,054,640	-		Pf1N1B4_928	0.72	-1.1
1,054,640	-		Pf1N1B4_928	0.72	+0.8
1,054,725	+				+0.5
1,054,725	+		Pf1N1B4_928	0.89	-0.7
1,054,725	+		Pf1N1B4_928	0.89	-0.7
1,054,726	-		Pf1N1B4_928	0.90	-0.9
1,054,726	-		Pf1N1B4_928	0.90	+0.5
1,054,726	-		Pf1N1B4_928	0.90	-0.5
1,054,743	+				+0.1
1,054,743	+				+0.5
1,054,743	+				+0.7
1,054,743	+				+1.0
1,054,743	+				-0.2
1,054,743	+				-0.5
1,054,743	+				-0.6
1,054,743	+				-0.7
1,054,743	+				-0.6
1,054,743	+				-0.0
1,054,743	+				-0.9
1,054,743	+				+0.5
1,054,743	+				-1.1
1,054,743	+				+0.8
1,054,743	+				-1.1
1,054,743	+				-0.9
1,054,743	+				+2.4
1,054,743	+				+0.6
1,054,743	+				-0.5
1,054,743	+				-1.7
1,054,743	+				-0.5
1,054,743	+				-0.5
1,054,743	+				-1.1
1,054,744	-				-0.5
1,054,744	-				-0.3
1,054,744	-				+1.1
1,054,744	-				-0.1
1,054,744	-				-1.5
1,054,744	-				-0.8
1,054,744	-				+0.3
1,054,744	-				-0.5
1,054,744	-				-2.0
1,054,744	-				+0.7
1,054,744	-				-0.5
1,054,744	-				-0.1
1,054,744	-				+0.4
1,054,744	-				-0.6
1,054,744	-				+0.7
1,054,744	-				+0.1
1,054,839	-				-0.7
1,054,839	-				-0.5
1,054,912	+				-1.0
1,054,913	-				-0.2
1,054,913	-				+0.1
1,054,913	-				+1.5
1,054,913	-				-1.2
1,054,931	-				-2.2
1,054,931	-				-0.3
1,054,931	-				+1.1
1,054,931	-				+1.4
1,055,135	+		Pf1N1B4_929	0.56	-0.2
1,055,136	-		Pf1N1B4_929	0.56	-0.2
1,055,136	-		Pf1N1B4_929	0.56	-0.7
1,055,209	-		Pf1N1B4_929	0.78	-0.1
1,055,209	-		Pf1N1B4_929	0.78	+1.7
1,055,233	-		Pf1N1B4_929	0.86	-1.9
1,055,237	-		Pf1N1B4_929	0.87	-1.2
1,055,288	+				-0.7
1,055,289	-				-0.7