Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_88

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
91,565	+		Pf1N1B4_87	0.74	+0.3
91,566	-		Pf1N1B4_87	0.74	-2.7
91,619	+				-0.2
91,619	+		Pf1N1B4_87	0.76	-0.6
91,619	+		Pf1N1B4_87	0.76	+1.8
91,619	+		Pf1N1B4_87	0.76	-0.6
91,619	+		Pf1N1B4_87	0.76	-0.2
91,619	+		Pf1N1B4_87	0.76	-0.2
91,619	+		Pf1N1B4_87	0.76	-2.8
91,619	+		Pf1N1B4_87	0.76	+0.8
91,619	+		Pf1N1B4_87	0.76	+0.6
91,619	+		Pf1N1B4_87	0.76	-0.5
91,619	+		Pf1N1B4_87	0.76	+0.4
91,620	-		Pf1N1B4_87	0.76	+0.3
91,620	-		Pf1N1B4_87	0.76	-0.6
91,620	-		Pf1N1B4_87	0.76	+2.0
91,658	+		Pf1N1B4_87	0.78	-0.8
91,659	-		Pf1N1B4_87	0.78	+1.4
91,659	-		Pf1N1B4_87	0.78	-0.9
91,817	+		Pf1N1B4_87	0.84	+1.4
91,817	+		Pf1N1B4_87	0.84	+1.5
91,817	+		Pf1N1B4_87	0.84	+0.6
91,849	+		Pf1N1B4_87	0.86	-0.7
91,850	-		Pf1N1B4_87	0.86	-1.2
91,850	-		Pf1N1B4_87	0.86	+1.4
92,152	+				+3.4
92,181	+				+0.3
92,182	-				-0.4
92,198	+				-0.8
92,198	+				-0.0
92,347	+				-1.0
92,347	+				+0.0
92,370	+				+1.1
92,370	+				+0.4
92,446	-				-1.2
92,545	+		Pf1N1B4_88	0.13	-0.8
92,545	+		Pf1N1B4_88	0.13	-0.6
92,546	-		Pf1N1B4_88	0.14	+0.8
92,546	-		Pf1N1B4_88	0.14	+1.4
92,546	-				+0.8
92,546	-		Pf1N1B4_88	0.14	-0.5
92,660	+		Pf1N1B4_88	0.39	+0.6
92,661	-		Pf1N1B4_88	0.40	+0.4
92,909	+				-0.4
92,910	-				+0.8
92,910	-				+0.0
92,910	-				+0.5
92,910	-				+0.0
92,991	+				-0.2
92,995	+				+0.3
92,995	+				+0.8
92,995	+				-2.2
92,996	-				-0.8
93,008	-				+1.0
93,227	+		Pf1N1B4_89	0.27	-0.8
93,389	+		Pf1N1B4_89	0.53	-0.6
93,389	+		Pf1N1B4_89	0.53	-0.4
93,389	+		Pf1N1B4_89	0.53	-2.0
93,389	+				+1.0
93,389	+		Pf1N1B4_89	0.53	-2.7
93,389	+		Pf1N1B4_89	0.53	-0.6
93,389	+		Pf1N1B4_89	0.53	+0.5
93,389	+		Pf1N1B4_89	0.53	-0.2
93,389	+				+0.8
93,390	-		Pf1N1B4_89	0.53	-2.1
93,390	-		Pf1N1B4_89	0.53	+1.4
93,390	-		Pf1N1B4_89	0.53	-0.8
93,390	-		Pf1N1B4_89	0.53	-0.5
93,390	-		Pf1N1B4_89	0.53	+1.3
93,390	-				-1.8
93,390	-		Pf1N1B4_89	0.53	+0.8
93,390	-		Pf1N1B4_89	0.53	+1.8
93,390	-		Pf1N1B4_89	0.53	+0.6
93,390	-		Pf1N1B4_89	0.53	-0.2
93,390	-		Pf1N1B4_89	0.53	-0.8
93,390	-		Pf1N1B4_89	0.53	-0.1
93,390	-		Pf1N1B4_89	0.53	+1.8
93,390	-		Pf1N1B4_89	0.53	+1.2
93,474	+		Pf1N1B4_89	0.67	+1.0
93,475	-				+3.1
93,475	-				+1.8
93,674	+				+0.2
93,674	+				+0.5
93,674	+				-0.6
93,674	+				-0.5
93,674	+				+1.5
93,674	+				+1.8
93,675	-				-0.2
93,675	-				+1.8
93,675	-				-0.2
93,675	-				-1.6
93,682	+				-0.7
93,682	+				+1.4
93,682	+				-1.0
93,682	+				+1.2
93,683	-				-0.4
93,683	-				+1.0
93,709	+				+1.1
93,736	+				-0.2
93,750	+				-1.0
93,750	+				-1.2
93,750	+				+1.1
93,751	-				-0.0
93,760	+				-0.9
93,830	-				-1.0
93,830	-				-0.1
93,875	+				+0.5
93,876	-				-0.3