Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4356

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,813,194	+		Pf1N1B4_4355	0.71	+0.3
4,813,194	+		Pf1N1B4_4355	0.71	-0.5
4,813,194	+		Pf1N1B4_4355	0.71	+0.1
4,813,426	+		Pf1N1B4_4355	0.87	-2.7
4,813,500	+				+0.1
4,813,587	+				+1.1
4,813,587	+				-2.8
4,813,587	+				-0.5
4,813,587	+				-0.2
4,813,587	+				-0.8
4,813,587	+				-0.6
4,813,587	+				-0.1
4,813,588	-				-0.8
4,813,588	-				+0.5
4,813,588	-				+0.9
4,813,620	+				+0.1
4,813,629	+				+0.3
4,813,630	-				-0.5
4,813,675	-				-1.5
4,813,675	-				+0.2
4,813,706	+				+0.5
4,813,706	+				-0.8
4,813,706	+				-0.5
4,813,707	-				+0.4
4,813,715	-				-0.8
4,813,717	+				-0.8
4,814,197	+		Pf1N1B4_4356	0.40	-0.7
4,814,518	+		Pf1N1B4_4356	0.65	-0.2
4,814,518	+		Pf1N1B4_4356	0.65	-0.0
4,814,519	-		Pf1N1B4_4356	0.65	-0.1
4,814,519	-		Pf1N1B4_4356	0.65	+0.3
4,814,519	-		Pf1N1B4_4356	0.65	+1.7
4,814,539	+		Pf1N1B4_4356	0.67	+0.1
4,814,540	-		Pf1N1B4_4356	0.67	+1.7
4,814,764	+		Pf1N1B4_4356	0.84	-0.3
4,814,767	+				+1.8
4,814,767	+		Pf1N1B4_4356	0.84	+0.3
4,814,767	+		Pf1N1B4_4356	0.84	-0.2
4,814,767	+				-0.5
4,814,767	+		Pf1N1B4_4356	0.84	+1.0
4,814,767	+		Pf1N1B4_4356	0.84	-0.2
4,814,767	+		Pf1N1B4_4356	0.84	-1.7
4,814,768	-		Pf1N1B4_4356	0.84	+1.2
4,814,768	-		Pf1N1B4_4356	0.84	-0.5
4,814,768	-		Pf1N1B4_4356	0.84	-0.8
4,814,942	-				-0.5
4,814,967	+				+0.5
4,814,971	+				-0.5
4,814,971	+				+0.5
4,814,971	+				-1.8
4,814,971	+				-0.7
4,814,972	-				-1.8
4,814,972	-				-1.1
4,815,017	-				+0.5
4,815,231	-				-0.1
4,815,231	-				+0.9
4,815,287	-				-1.5
4,815,287	-				+0.1
4,815,370	+				+0.5
4,815,370	+				-0.5
4,815,371	-				-0.9
4,815,375	-				-1.2
4,815,421	-				-0.4
4,815,611	+		Pf1N1B4_4357	0.39	-0.5
4,815,611	+		Pf1N1B4_4357	0.39	+0.7
4,815,611	+		Pf1N1B4_4357	0.39	-1.8
4,815,611	+		Pf1N1B4_4357	0.39	-1.8
4,815,612	-		Pf1N1B4_4357	0.40	-0.7
4,815,826	+		Pf1N1B4_4357	0.79	+0.7