Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4118

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,559,691	-		Pf1N1B4_4117	0.22	-0.8
4,559,932	+				-0.6
4,559,932	+				+0.6
4,559,932	+				-1.2
4,560,044	-				+0.0
4,560,076	+				+1.4
4,560,080	+				-0.0
4,560,080	+				-0.4
4,560,081	-				-1.0
4,560,090	+				-2.2
4,560,091	-				-1.2
4,560,149	+				+0.0
4,560,247	-				-1.4
4,560,247	-				+1.1
4,560,304	-				+0.8
4,560,352	-				+0.2
4,560,352	-				+0.6
4,560,355	+				+0.6
4,560,356	-				-0.4
4,560,356	-				+1.0
4,560,508	+				+0.1
4,560,509	-				-1.6
4,560,509	-				-1.8
4,560,509	-				-0.8
4,560,512	+				-2.7
4,560,512	+				-1.9
4,560,513	-				-1.7
4,560,513	-				-1.0
4,560,575	+				+0.0
4,560,575	+				+1.2
4,560,575	+				-0.7
4,560,575	+				-0.4
4,560,576	-				-1.0
4,560,576	-				+0.6
4,560,675	+				-2.1
4,560,675	+				+0.1
4,560,676	-				-0.4
4,560,676	-				-0.8
4,560,676	-				-1.0
4,560,689	+				+0.6
4,560,689	+				-1.0
4,560,689	+				-0.7
4,560,690	-				+0.4
4,560,690	-				-0.6
4,560,690	-				-2.4
4,560,690	-				-0.7
4,560,741	+				+0.6
4,560,741	+				-1.2
4,560,742	-				-0.1
4,560,742	-				+0.6
4,560,877	+				-0.4
4,560,878	-		Pf1N1B4_4118	0.23	+0.6
4,561,009	+		Pf1N1B4_4118	0.37	+1.2
4,561,151	-		Pf1N1B4_4118	0.52	+0.3
4,561,151	-		Pf1N1B4_4118	0.52	-1.4
4,561,159	+				-1.0
4,561,159	+		Pf1N1B4_4118	0.53	+0.0
4,561,165	+		Pf1N1B4_4118	0.54	-0.6
4,561,447	+		Pf1N1B4_4118	0.84	+0.1
4,561,592	-				-1.3
4,561,684	-				+1.9
4,561,742	+				-1.0
4,561,837	+				+1.0
4,561,838	-				-0.3
4,561,838	-				+0.6
4,561,838	-				-1.7
4,561,892	+				+0.6
4,561,892	+				+0.3
4,561,892	+				-0.2
4,561,892	+				-1.4
4,561,893	-				+0.3
4,561,893	-				-1.0
4,561,922	+				-0.4
4,561,975	+				-1.4
4,562,079	+				-0.2
4,562,084	+				+1.6
4,562,146	+		Pf1N1B4_4119	0.21	+0.1
4,562,147	-		Pf1N1B4_4119	0.21	-1.4
4,562,185	+		Pf1N1B4_4119	0.34	-1.2
4,562,186	-		Pf1N1B4_4119	0.34	-2.4
4,562,186	-		Pf1N1B4_4119	0.34	-0.0
4,562,279	+		Pf1N1B4_4119	0.64	+0.7
4,562,279	+		Pf1N1B4_4119	0.64	-0.8
4,562,417	+				+1.0
4,562,587	+		Pf1N1B4_4120	0.68	-0.1
4,562,588	-		Pf1N1B4_4120	0.68	+0.4