Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4029
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
4,479,228 | + | Pf1N1B4_4028 | 0.67 | -1.2 | |
4,479,228 | + | Pf1N1B4_4028 | 0.67 | -2.1 | |
4,479,229 | - | Pf1N1B4_4028 | 0.67 | -1.6 | |
4,479,435 | + | Pf1N1B4_4028 | 0.81 | -0.9 | |
4,479,489 | + | Pf1N1B4_4028 | 0.84 | -0.0 | |
4,479,490 | - | Pf1N1B4_4028 | 0.85 | +0.7 | |
4,479,830 | - | +0.7 | |||
4,480,155 | - | Pf1N1B4_4029 | 0.28 | -0.9 | |
4,480,162 | + | Pf1N1B4_4029 | 0.29 | -1.3 | |
4,480,259 | - | Pf1N1B4_4029 | 0.35 | -1.5 | |
4,480,259 | - | Pf1N1B4_4029 | 0.35 | -1.6 | |
4,480,352 | - | Pf1N1B4_4029 | 0.41 | -0.6 | |
4,480,444 | + | Pf1N1B4_4029 | 0.47 | -0.6 | |
4,480,444 | + | Pf1N1B4_4029 | 0.47 | -0.3 | |
4,480,588 | + | Pf1N1B4_4029 | 0.56 | -0.5 | |
4,480,801 | + | Pf1N1B4_4029 | 0.70 | -0.9 | |
4,480,802 | - | Pf1N1B4_4029 | 0.70 | -1.1 | |
4,481,325 | + | -1.8 | |||
4,481,861 | - | Pf1N1B4_4030 | 0.31 | -0.9 | |
4,481,861 | - | Pf1N1B4_4030 | 0.31 | -0.7 | |
4,481,954 | - | Pf1N1B4_4030 | 0.36 | -0.3 | |
4,482,168 | + | Pf1N1B4_4030 | 0.47 | -0.5 | |
4,482,215 | - | Pf1N1B4_4030 | 0.50 | +1.3 |
Or see this region's nucleotide sequence