Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3886

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,313,376	-				-0.8
4,313,409	+				-0.3
4,313,409	+				-0.7
4,313,409	+				+0.2
4,313,411	+				+0.2
4,313,411	+				-0.3
4,313,411	+				-0.7
4,313,411	+				-1.8
4,313,412	-				-1.0
4,313,412	-				-0.8
4,313,412	-				-0.8
4,313,412	-				-0.3
4,313,412	-				+1.1
4,313,412	-				-0.4
4,313,412	-				-1.1
4,313,412	-				+0.7
4,313,420	+				-1.6
4,313,421	-				-0.3
4,313,649	+		Pf1N1B4_3885	0.31	+0.6
4,313,649	+		Pf1N1B4_3885	0.31	-0.8
4,313,730	+		Pf1N1B4_3885	0.43	-1.3
4,313,730	+		Pf1N1B4_3885	0.43	+0.3
4,313,730	+		Pf1N1B4_3885	0.43	+1.1
4,313,730	+		Pf1N1B4_3885	0.43	-2.4
4,313,730	+		Pf1N1B4_3885	0.43	-1.8
4,313,731	-		Pf1N1B4_3885	0.44	+0.3
4,313,731	-				+0.7
4,313,731	-		Pf1N1B4_3885	0.44	-0.4
4,313,731	-		Pf1N1B4_3885	0.44	+0.7
4,313,731	-		Pf1N1B4_3885	0.44	-0.5
4,313,859	+		Pf1N1B4_3885	0.62	+0.0
4,313,859	+		Pf1N1B4_3885	0.62	+0.7
4,313,859	+		Pf1N1B4_3885	0.62	-0.7
4,313,977	-		Pf1N1B4_3885	0.80	-1.1
4,313,977	-		Pf1N1B4_3885	0.80	+0.1
4,314,056	+				-0.6
4,314,057	-				+1.7
4,314,177	+				-0.4
4,314,205	+				-2.1
4,314,206	-				-0.6
4,314,269	+				-0.7
4,314,316	+				-0.7
4,314,316	+				-2.3
4,314,317	-				-0.4
4,314,349	-				-0.5
4,314,349	-				+1.0
4,315,233	+		Pf1N1B4_3886	0.58	-2.1
4,315,233	+		Pf1N1B4_3886	0.58	-0.3
4,315,233	+		Pf1N1B4_3886	0.58	+0.4
4,315,233	+		Pf1N1B4_3886	0.58	+1.7
4,315,233	+		Pf1N1B4_3886	0.58	+1.3
4,315,233	+		Pf1N1B4_3886	0.58	+0.1
4,315,233	+		Pf1N1B4_3886	0.58	+1.1
4,315,233	+		Pf1N1B4_3886	0.58	+0.7
4,315,234	-		Pf1N1B4_3886	0.58	+0.2
4,315,234	-		Pf1N1B4_3886	0.58	+0.4
4,315,234	-		Pf1N1B4_3886	0.58	-0.3
4,315,234	-		Pf1N1B4_3886	0.58	+0.4
4,315,497	+				-0.3
4,315,498	-		Pf1N1B4_3886	0.75	-0.8
4,315,498	-		Pf1N1B4_3886	0.75	-0.3
4,315,498	-		Pf1N1B4_3886	0.75	+0.5
4,315,594	-		Pf1N1B4_3886	0.81	+1.2
4,315,594	-		Pf1N1B4_3886	0.81	+0.3
4,315,609	-		Pf1N1B4_3886	0.82	-0.3
4,315,791	+				+0.4
4,315,791	+				+0.1
4,315,791	+				+0.3
4,315,792	-				-0.3
4,315,938	-				-0.7
4,315,938	-				+1.6
4,316,009	+				+0.1
4,316,183	-		Pf1N1B4_3887	0.24	-1.5
4,316,243	+		Pf1N1B4_3887	0.32	+0.1
4,316,243	+		Pf1N1B4_3887	0.32	-1.7
4,316,498	+		Pf1N1B4_3887	0.64	-1.8
4,316,499	-		Pf1N1B4_3887	0.64	-0.1
4,316,527	-		Pf1N1B4_3887	0.68	+0.7
4,316,625	-				-0.3
4,316,717	+				-0.3
4,316,717	+				-0.1
4,316,759	+				-0.0
4,316,759	+				-0.8
4,316,760	-				-2.4
4,316,760	-				+0.3