Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3808

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,218,708	-		Pf1N1B4_3807	0.89	+2.2
4,218,716	+		Pf1N1B4_3807	0.90	-0.0
4,218,716	+		Pf1N1B4_3807	0.90	+0.1
4,218,716	+				-0.2
4,218,716	+		Pf1N1B4_3807	0.90	-0.2
4,218,717	-		Pf1N1B4_3807	0.90	+0.0
4,218,717	-		Pf1N1B4_3807	0.90	-0.7
4,218,717	-		Pf1N1B4_3807	0.90	+0.5
4,218,717	-		Pf1N1B4_3807	0.90	-2.4
4,218,717	-				+0.0
4,218,859	-				+0.2
4,218,930	+				+1.5
4,218,930	+				-1.6
4,218,930	+				+1.8
4,218,931	-				+0.8
4,219,402	-				-2.4
4,219,418	+				+0.4
4,219,528	+				-0.1
4,219,565	+		Pf1N1B4_3808	0.11	+0.8
4,219,569	+		Pf1N1B4_3808	0.12	-2.3
4,219,569	+		Pf1N1B4_3808	0.12	-0.1
4,219,569	+		Pf1N1B4_3808	0.12	+2.1
4,219,569	+		Pf1N1B4_3808	0.12	+0.8
4,219,569	+		Pf1N1B4_3808	0.12	+0.9
4,219,569	+		Pf1N1B4_3808	0.12	+1.8
4,219,570	-		Pf1N1B4_3808	0.12	+0.0
4,219,671	+		Pf1N1B4_3808	0.27	-1.6
4,219,671	+		Pf1N1B4_3808	0.27	-1.4
4,219,700	+		Pf1N1B4_3808	0.31	+0.8
4,219,700	+		Pf1N1B4_3808	0.31	+0.3
4,219,817	+		Pf1N1B4_3808	0.48	+1.0
4,220,123	+				+0.8
4,220,124	-				-1.6
4,220,185	+				+1.5
4,220,185	+				-0.7
4,220,186	-				-2.4
4,220,186	-				-0.2
4,220,186	-				+0.5
4,220,249	+				+0.2
4,220,250	-				-2.0
4,220,339	-				+0.0
4,220,339	-				-1.2
4,220,362	+				+2.6
4,220,363	-				-1.4
4,220,363	-				+0.8
4,220,363	-				+0.4
4,220,363	-				-1.0
4,220,363	-				-0.2
4,220,363	-				+1.1
4,220,569	+				+1.8
4,220,923	+		Pf1N1B4_3809	0.84	-1.2
4,220,923	+		Pf1N1B4_3809	0.84	-2.2
4,220,923	+		Pf1N1B4_3809	0.84	-0.2
4,220,923	+		Pf1N1B4_3809	0.84	-1.1
4,220,924	-		Pf1N1B4_3809	0.85	-0.2
4,220,924	-		Pf1N1B4_3809	0.85	-0.1
4,220,924	-		Pf1N1B4_3809	0.85	-0.3
4,221,009	+				-0.7
4,221,009	+				+1.0
4,221,009	+				-0.8
4,221,010	-				-0.7
4,221,010	-				+0.0
4,221,010	-				+0.0
4,221,101	+				+0.3
4,221,101	+				-0.8
4,221,101	+				-0.8
4,221,112	+				+0.3
4,221,126	+				-0.8
4,221,126	+				+0.3
4,221,127	-				+0.0
4,221,129	-				-0.4
4,221,129	-				+0.2
4,221,137	+				+0.6
4,221,150	+				-0.3
4,221,150	+				-0.4
4,221,150	+				+1.5
4,221,152	+				+0.8