Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3591

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,002,225	+		Pf1N1B4_3589	0.37	-0.6
4,002,226	-		Pf1N1B4_3589	0.37	+0.1
4,002,226	-		Pf1N1B4_3589	0.37	-0.0
4,002,226	-		Pf1N1B4_3589	0.37	-0.1
4,002,256	+		Pf1N1B4_3589	0.40	-0.8
4,002,257	-		Pf1N1B4_3589	0.40	+0.9
4,002,402	+		Pf1N1B4_3589	0.54	+0.4
4,002,704	-		Pf1N1B4_3589	0.83	-0.0
4,002,721	-		Pf1N1B4_3589	0.84	-1.1
4,002,721	-		Pf1N1B4_3589	0.84	+0.2
4,002,721	-		Pf1N1B4_3589	0.84	-0.3
4,002,721	-		Pf1N1B4_3589	0.84	-0.3
4,002,721	-		Pf1N1B4_3589	0.84	-1.1
4,002,721	-		Pf1N1B4_3589	0.84	-0.8
4,002,721	-		Pf1N1B4_3589	0.84	-2.0
4,002,721	-		Pf1N1B4_3589	0.84	-0.4
4,002,721	-		Pf1N1B4_3589	0.84	-1.6
4,002,721	-		Pf1N1B4_3589	0.84	-0.6
4,002,721	-		Pf1N1B4_3589	0.84	-0.7
4,002,721	-		Pf1N1B4_3589	0.84	-1.1
4,002,915	-				-2.1
4,002,934	-				-0.9
4,002,934	-				-0.3
4,002,951	+				-0.1
4,002,952	-				-1.7
4,002,952	-				-0.6
4,002,952	-				-1.4
4,002,952	-				-0.5
4,002,952	-				-1.0
4,002,952	-				-0.9
4,002,957	-				-1.1
4,002,957	-				-0.4
4,002,957	-				-0.7
4,002,957	-				-1.7
4,002,957	-				-0.6
4,002,957	-				-0.4
4,002,957	-				+0.0
4,002,957	-				-1.2
4,002,959	-				-0.5
4,003,009	-				-0.4
4,003,009	-				-0.0
4,003,009	-				-0.7
4,003,045	-				+0.9
4,003,089	-		Pf1N1B4_3590	0.33	-1.0
4,003,089	-		Pf1N1B4_3590	0.33	-1.1
4,003,101	-		Pf1N1B4_3590	0.42	-0.4
4,003,101	-		Pf1N1B4_3590	0.42	-0.3
4,003,128	+		Pf1N1B4_3590	0.62	-1.2
4,003,129	-		Pf1N1B4_3590	0.62	-0.8
4,003,145	+		Pf1N1B4_3590	0.74	-1.6
4,003,145	+		Pf1N1B4_3590	0.74	-1.2
4,003,145	+		Pf1N1B4_3590	0.74	+0.1
4,003,145	+		Pf1N1B4_3590	0.74	+0.3
4,003,145	+		Pf1N1B4_3590	0.74	+0.9
4,003,146	-		Pf1N1B4_3590	0.75	+0.1
4,003,146	-		Pf1N1B4_3590	0.75	-0.3
4,003,146	-		Pf1N1B4_3590	0.75	-0.6
4,003,146	-		Pf1N1B4_3590	0.75	-1.0
4,003,172	+				-1.0
4,003,172	+				-0.1
4,003,172	+				-0.4
4,003,172	+				+0.4
4,003,173	-				-0.0
4,003,173	-				-0.4
4,003,173	-				-1.0
4,003,173	-				-0.9
4,003,173	-				-0.7
4,003,173	-				-0.5
4,003,173	-				-1.9
4,003,173	-				+1.0
4,003,173	-				-1.3
4,003,444	+		Pf1N1B4_3591	0.32	-0.6
4,003,445	-		Pf1N1B4_3591	0.32	-1.2
4,003,466	+		Pf1N1B4_3591	0.34	-0.6
4,003,466	+		Pf1N1B4_3591	0.34	-2.1
4,003,467	-		Pf1N1B4_3591	0.34	-2.2
4,003,467	-		Pf1N1B4_3591	0.34	-1.2
4,003,481	+		Pf1N1B4_3591	0.36	-1.7
4,003,481	+		Pf1N1B4_3591	0.36	-1.2
4,003,481	+		Pf1N1B4_3591	0.36	-1.1
4,003,481	+		Pf1N1B4_3591	0.36	-0.8
4,003,481	+		Pf1N1B4_3591	0.36	-1.0
4,003,482	-		Pf1N1B4_3591	0.36	-0.7
4,003,482	-		Pf1N1B4_3591	0.36	-1.2
4,003,482	-		Pf1N1B4_3591	0.36	+0.6
4,003,482	-		Pf1N1B4_3591	0.36	-1.2
4,003,547	+		Pf1N1B4_3591	0.44	-0.8
4,003,918	+		Pf1N1B4_3591	0.86	-1.3
4,003,918	+		Pf1N1B4_3591	0.86	-0.7
4,004,033	+				-0.9
4,004,033	+				-0.7
4,004,033	+				-0.8
4,004,033	+				-0.3
4,004,033	+				-0.6
4,004,033	+				-0.7
4,004,034	-				+0.6
4,004,034	-				+0.6
4,004,034	-				-0.6
4,004,034	-				-1.7
4,004,034	-				-2.0
4,004,034	-				+0.1
4,004,034	-				-0.0
4,004,034	-				-1.2
4,004,034	-				-0.9
4,004,034	-				-0.6
4,004,034	-				-0.2
4,004,050	+				-0.2
4,004,050	+				+1.4
4,004,050	+				-2.5
4,004,051	-				-0.4
4,004,051	-				+1.3
4,004,083	+				+0.1
4,004,097	-				-0.5
4,004,163	-				-0.2
4,004,163	-				+0.1
4,004,417	+		Pf1N1B4_3592	0.22	+0.8
4,004,417	+		Pf1N1B4_3592	0.22	+1.8
4,004,418	-		Pf1N1B4_3592	0.22	-1.7
4,004,418	-		Pf1N1B4_3592	0.22	-0.5
4,004,418	-		Pf1N1B4_3592	0.22	+0.5
4,004,418	-				+0.8
4,004,423	+		Pf1N1B4_3592	0.23	-1.2
4,004,423	+		Pf1N1B4_3592	0.23	-0.9
4,004,423	+		Pf1N1B4_3592	0.23	-0.2
4,004,423	+		Pf1N1B4_3592	0.23	-1.7
4,004,423	+		Pf1N1B4_3592	0.23	+1.2
4,004,423	+		Pf1N1B4_3592	0.23	-1.0
4,004,423	+		Pf1N1B4_3592	0.23	+0.8
4,004,423	+		Pf1N1B4_3592	0.23	-0.2
4,004,423	+				-1.2
4,004,424	-		Pf1N1B4_3592	0.23	-0.0
4,004,424	-		Pf1N1B4_3592	0.23	+0.1
4,004,424	-		Pf1N1B4_3592	0.23	-0.6
4,004,424	-		Pf1N1B4_3592	0.23	-0.7
4,004,424	-		Pf1N1B4_3592	0.23	-0.4
4,004,424	-		Pf1N1B4_3592	0.23	+0.7
4,004,424	-				+0.5
4,004,424	-		Pf1N1B4_3592	0.23	+0.7
4,004,424	-		Pf1N1B4_3592	0.23	-1.7
4,004,424	-		Pf1N1B4_3592	0.23	-1.0
4,004,424	-		Pf1N1B4_3592	0.23	-0.2
4,004,424	-		Pf1N1B4_3592	0.23	-1.2
4,004,424	-		Pf1N1B4_3592	0.23	-0.7
4,004,424	-		Pf1N1B4_3592	0.23	+0.7
4,004,424	-		Pf1N1B4_3592	0.23	-0.9
4,004,424	-		Pf1N1B4_3592	0.23	-0.9
4,004,424	-		Pf1N1B4_3592	0.23	+0.3
4,004,424	-		Pf1N1B4_3592	0.23	-0.6
4,004,424	-		Pf1N1B4_3592	0.23	-0.2
4,004,424	-		Pf1N1B4_3592	0.23	-2.2
4,004,427	+		Pf1N1B4_3592	0.23	+0.1
4,004,427	+				+0.8
4,004,428	-				-0.7
4,004,428	-		Pf1N1B4_3592	0.23	+0.8
4,004,512	+		Pf1N1B4_3592	0.30	+0.0
4,004,513	-				-0.2
4,004,513	-		Pf1N1B4_3592	0.30	-1.2
4,004,513	-		Pf1N1B4_3592	0.30	+0.5
4,004,513	-		Pf1N1B4_3592	0.30	-0.7
4,004,513	-		Pf1N1B4_3592	0.30	+0.6
4,004,526	-		Pf1N1B4_3592	0.31	+0.8
4,004,526	-		Pf1N1B4_3592	0.31	-0.2
4,004,584	+		Pf1N1B4_3592	0.35	+1.0
4,004,584	+		Pf1N1B4_3592	0.35	-0.4
4,004,585	-		Pf1N1B4_3592	0.35	-0.9
4,004,669	+		Pf1N1B4_3592	0.42	-0.3
4,004,669	+		Pf1N1B4_3592	0.42	+0.8
4,004,669	+		Pf1N1B4_3592	0.42	+0.1
4,004,670	-				+1.4
4,004,919	+		Pf1N1B4_3592	0.61	-1.4
4,004,919	+		Pf1N1B4_3592	0.61	-1.2
4,004,919	+		Pf1N1B4_3592	0.61	-0.9
4,004,958	+		Pf1N1B4_3592	0.64	-0.2
4,004,958	+		Pf1N1B4_3592	0.64	-1.0
4,004,958	+		Pf1N1B4_3592	0.64	-0.2
4,004,958	+		Pf1N1B4_3592	0.64	-0.2
4,004,971	+		Pf1N1B4_3592	0.65	+0.0
4,004,971	+		Pf1N1B4_3592	0.65	+0.3
4,004,971	+		Pf1N1B4_3592	0.65	+2.4
4,004,971	+		Pf1N1B4_3592	0.65	-0.7
4,004,972	-		Pf1N1B4_3592	0.65	+0.7
4,004,972	-		Pf1N1B4_3592	0.65	-0.7
4,004,972	-		Pf1N1B4_3592	0.65	-0.5
4,004,972	-				-1.7
4,004,972	-		Pf1N1B4_3592	0.65	-1.4
4,004,972	-		Pf1N1B4_3592	0.65	-2.3
4,004,972	-		Pf1N1B4_3592	0.65	-0.6
4,004,972	-		Pf1N1B4_3592	0.65	-2.5
4,004,974	-		Pf1N1B4_3592	0.65	-0.2
4,005,022	+		Pf1N1B4_3592	0.69	+0.2
4,005,022	+		Pf1N1B4_3592	0.69	-0.2
4,005,022	+		Pf1N1B4_3592	0.69	-0.5
4,005,022	+		Pf1N1B4_3592	0.69	-0.7
4,005,023	-		Pf1N1B4_3592	0.69	-0.2