Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3504

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,908,037	-				-1.7
3,908,037	-				-2.3
3,908,037	-				-1.1
3,908,037	-				+0.9
3,908,082	+				+0.3
3,908,339	+				-0.5
3,908,339	+				+0.3
3,908,339	+				-0.1
3,908,339	+				+0.9
3,908,340	-				+1.2
3,908,585	+		Pf1N1B4_3503	0.39	+0.5
3,908,786	-		Pf1N1B4_3503	0.69	-0.7
3,908,786	-		Pf1N1B4_3503	0.69	-0.1
3,908,786	-		Pf1N1B4_3503	0.69	+0.3
3,908,786	-		Pf1N1B4_3503	0.69	-2.3
3,908,811	+		Pf1N1B4_3503	0.72	-0.6
3,908,811	+		Pf1N1B4_3503	0.72	-0.7
3,908,811	+		Pf1N1B4_3503	0.72	-1.0
3,908,811	+				+1.3
3,908,812	-				+1.6
3,908,812	-		Pf1N1B4_3503	0.72	-0.1
3,908,812	-		Pf1N1B4_3503	0.72	+0.5
3,908,812	-		Pf1N1B4_3503	0.72	+0.1
3,908,841	+		Pf1N1B4_3503	0.77	+0.9
3,908,841	+		Pf1N1B4_3503	0.77	+0.5
3,908,945	-				+0.6
3,908,963	+				-0.3
3,908,967	+				-1.1
3,908,967	+				+0.2
3,908,967	+				+0.6
3,908,967	+				+0.9
3,908,968	-				-0.0
3,908,968	-				-1.4
3,909,090	+				-0.3
3,909,091	-				+2.1
3,909,140	+		Pf1N1B4_3504	0.10	-1.6
3,909,434	+		Pf1N1B4_3504	0.31	-0.1
3,909,434	+		Pf1N1B4_3504	0.31	-1.7
3,909,435	-		Pf1N1B4_3504	0.31	-0.9
3,909,662	+		Pf1N1B4_3504	0.47	-0.0
3,909,662	+		Pf1N1B4_3504	0.47	-0.5
3,909,663	-		Pf1N1B4_3504	0.47	-0.9
3,909,942	+		Pf1N1B4_3504	0.67	-1.4
3,909,942	+		Pf1N1B4_3504	0.67	-1.7
3,910,498	+				-1.3
3,910,499	-				-0.2
3,910,499	-				+2.1
3,910,504	+				-0.3
3,910,505	-				+0.2
3,910,505	-				-1.0
3,910,505	-				+0.9
3,910,505	-				+0.9
3,910,505	-				+0.6
3,910,524	-				+0.7
3,910,537	+				-0.1
3,910,537	+				+0.4
3,910,537	+				+1.6
3,910,538	-				-0.1
3,910,556	+				+1.3
3,910,556	+				-0.3
3,910,557	-				+0.2
3,910,557	-				+0.6
3,910,557	-				-0.2
3,910,695	-				-0.1
3,910,695	-				-0.6
3,910,713	+				-1.4
3,910,714	-		Pf1N1B4_3505	0.12	+1.3
3,910,731	+		Pf1N1B4_3505	0.13	-0.1
3,910,731	+		Pf1N1B4_3505	0.13	-0.3
3,910,731	+		Pf1N1B4_3505	0.13	-2.4
3,910,731	+		Pf1N1B4_3505	0.13	-0.1
3,910,731	+		Pf1N1B4_3505	0.13	-0.7
3,910,732	-		Pf1N1B4_3505	0.14	-0.4
3,910,732	-		Pf1N1B4_3505	0.14	-1.1
3,910,732	-		Pf1N1B4_3505	0.14	-0.1
3,910,732	-		Pf1N1B4_3505	0.14	-0.7
3,910,732	-		Pf1N1B4_3505	0.14	-1.7
3,910,732	-		Pf1N1B4_3505	0.14	-0.1
3,910,732	-		Pf1N1B4_3505	0.14	+0.6
3,910,732	-		Pf1N1B4_3505	0.14	-0.2
3,910,733	+		Pf1N1B4_3505	0.14	-0.1
3,910,829	+		Pf1N1B4_3505	0.23	+0.1
3,910,863	+		Pf1N1B4_3505	0.26	+1.1
3,910,863	+		Pf1N1B4_3505	0.26	+1.2
3,910,864	-		Pf1N1B4_3505	0.26	+1.3
3,910,872	+		Pf1N1B4_3505	0.27	-1.0
3,910,872	+		Pf1N1B4_3505	0.27	-1.1
3,910,872	+		Pf1N1B4_3505	0.27	+1.2
3,910,872	+		Pf1N1B4_3505	0.27	+1.6
3,910,872	+		Pf1N1B4_3505	0.27	-0.2
3,910,873	-		Pf1N1B4_3505	0.27	+0.6
3,910,873	-		Pf1N1B4_3505	0.27	-0.4
3,910,873	-		Pf1N1B4_3505	0.27	-0.7
3,910,873	-		Pf1N1B4_3505	0.27	+0.5
3,910,950	-		Pf1N1B4_3505	0.35	+0.2
3,910,974	+		Pf1N1B4_3505	0.37	-0.1
3,910,975	-		Pf1N1B4_3505	0.37	-0.1
3,911,017	+		Pf1N1B4_3505	0.41	+1.9
3,911,017	+		Pf1N1B4_3505	0.41	+0.0
3,911,017	+		Pf1N1B4_3505	0.41	-2.2
3,911,116	+		Pf1N1B4_3505	0.51	-0.8
3,911,130	+		Pf1N1B4_3505	0.52	+0.3
3,911,130	+		Pf1N1B4_3505	0.52	-0.3
3,911,131	-		Pf1N1B4_3505	0.53	+0.7
3,911,131	-		Pf1N1B4_3505	0.53	+0.3
3,911,131	-		Pf1N1B4_3505	0.53	+0.2
3,911,318	+				-1.3
3,911,330	-				+1.3
3,911,342	+		Pf1N1B4_3505	0.73	+0.1
3,911,367	+		Pf1N1B4_3505	0.76	+1.3
3,911,388	+		Pf1N1B4_3505	0.78	-1.1
3,911,388	+		Pf1N1B4_3505	0.78	+0.4
3,911,389	-				-1.4