Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2835

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,180,682	+		Pf1N1B4_2834	0.31	+0.7
3,180,682	+		Pf1N1B4_2834	0.31	+0.2
3,180,682	+		Pf1N1B4_2834	0.31	-2.3
3,180,682	+		Pf1N1B4_2834	0.31	-0.5
3,180,682	+		Pf1N1B4_2834	0.31	-1.0
3,180,715	+		Pf1N1B4_2834	0.33	-1.2
3,180,716	-		Pf1N1B4_2834	0.33	+0.3
3,180,803	-		Pf1N1B4_2834	0.40	+2.7
3,180,926	+		Pf1N1B4_2834	0.49	+0.2
3,180,926	+		Pf1N1B4_2834	0.49	+0.2
3,181,032	+		Pf1N1B4_2834	0.57	-0.2
3,181,032	+		Pf1N1B4_2834	0.57	-0.8
3,181,033	-		Pf1N1B4_2834	0.57	+0.3
3,181,033	-				+1.4
3,181,036	+				-0.4
3,181,036	+		Pf1N1B4_2834	0.58	-0.2
3,181,036	+		Pf1N1B4_2834	0.58	-1.4
3,181,036	+		Pf1N1B4_2834	0.58	-1.4
3,181,036	+		Pf1N1B4_2834	0.58	-2.2
3,181,036	+		Pf1N1B4_2834	0.58	+0.3
3,181,037	-		Pf1N1B4_2834	0.58	-0.7
3,181,037	-		Pf1N1B4_2834	0.58	-1.0
3,181,037	-		Pf1N1B4_2834	0.58	+0.7
3,181,037	-		Pf1N1B4_2834	0.58	-0.6
3,181,037	-		Pf1N1B4_2834	0.58	-1.2
3,181,037	-		Pf1N1B4_2834	0.58	+0.4
3,181,037	-		Pf1N1B4_2834	0.58	+0.2
3,181,037	-		Pf1N1B4_2834	0.58	+1.2
3,181,037	-		Pf1N1B4_2834	0.58	-1.2
3,181,060	-				+1.9
3,181,111	+		Pf1N1B4_2834	0.63	+1.2
3,181,111	+		Pf1N1B4_2834	0.63	-0.9
3,181,111	+		Pf1N1B4_2834	0.63	+0.0
3,181,112	-		Pf1N1B4_2834	0.63	-0.9
3,181,294	+		Pf1N1B4_2834	0.77	+0.9
3,181,294	+		Pf1N1B4_2834	0.77	-0.8
3,181,294	+		Pf1N1B4_2834	0.77	-1.7
3,181,390	+				+2.1
3,181,390	+		Pf1N1B4_2834	0.84	+0.3
3,181,390	+		Pf1N1B4_2834	0.84	-0.3
3,181,390	+		Pf1N1B4_2834	0.84	-1.2
3,181,390	+		Pf1N1B4_2834	0.84	+0.3
3,181,391	-		Pf1N1B4_2834	0.85	-0.9
3,181,391	-		Pf1N1B4_2834	0.85	-0.4
3,181,466	-				+1.1
3,181,545	+				-0.8
3,181,573	+				+1.1
3,181,573	+				+1.1
3,181,573	+				+0.7
3,181,574	-				-0.0
3,181,574	-				-1.4
3,181,574	-				+1.6
3,181,574	-				-0.2
3,181,574	-				-0.0
3,181,589	+				-0.6
3,181,590	-				-0.7
3,181,636	+		Pf1N1B4_2835	0.14	-1.3
3,181,636	+		Pf1N1B4_2835	0.14	+0.2
3,181,636	+		Pf1N1B4_2835	0.14	-1.9
3,181,636	+		Pf1N1B4_2835	0.14	-0.7
3,181,637	-		Pf1N1B4_2835	0.14	-0.9
3,181,672	+		Pf1N1B4_2835	0.29	-1.4
3,181,672	+		Pf1N1B4_2835	0.29	-0.7
3,181,672	+		Pf1N1B4_2835	0.29	-1.2
3,181,672	+		Pf1N1B4_2835	0.29	+0.8
3,181,672	+		Pf1N1B4_2835	0.29	-1.0
3,181,672	+		Pf1N1B4_2835	0.29	+0.3
3,181,673	-		Pf1N1B4_2835	0.29	-0.2
3,181,673	-		Pf1N1B4_2835	0.29	-1.4
3,181,673	-		Pf1N1B4_2835	0.29	-1.1
3,181,673	-				+0.1
3,181,673	-		Pf1N1B4_2835	0.29	-0.4
3,181,882	+				+0.6
3,181,882	+				-0.3
3,181,940	+				-1.2
3,181,969	-				+1.4
3,181,972	+				+1.1
3,181,972	+				-0.9
3,181,972	+				-0.1
3,181,973	-				+0.5
3,181,973	-				-1.2
3,181,973	-				+1.6
3,182,166	+				-0.4
3,182,456	+				-0.4
3,182,456	+				+0.6
3,182,456	+				-1.2
3,182,456	+				-0.2
3,182,456	+				+0.9
3,182,456	+				+0.8
3,182,456	+				-0.4
3,182,457	-				-0.9
3,182,457	-				+1.1
3,182,457	-				+1.1
3,182,457	-				-0.7
3,182,457	-				+2.5
3,182,457	-				-1.9
3,182,457	-				+0.5
3,182,457	-				-1.2
3,182,457	-				-1.4
3,182,457	-				-0.0
3,182,460	+				-0.7
3,182,482	+				-0.3
3,182,483	-				+0.3
3,182,483	-				-0.1
3,182,483	-				+0.6
3,182,486	+				-0.0
3,182,486	+				-0.2
3,182,486	+				-0.6
3,182,487	-				-0.7
3,182,487	-				+0.3
3,182,487	-				-0.4
3,182,539	-				-1.4
3,182,539	-				+1.1
3,182,539	-				-0.7
3,182,539	-				-0.4
3,182,539	-				-0.3
3,182,539	-				-0.4
3,182,552	+				-1.4
3,182,552	+				-1.5
3,182,552	+				+0.9
3,182,552	+				-0.3
3,182,552	+				-1.2
3,182,552	+				-2.6
3,182,553	-				+0.7
3,182,553	-				-1.7
3,182,553	-				-1.0
3,182,553	-				+0.1
3,182,618	+				+0.4
3,182,618	+				-2.0
3,182,619	-				-1.2
3,182,619	-				+0.1
3,182,619	-				-0.9
3,182,656	+				-0.1
3,182,656	+				-0.1
3,182,656	+				+0.6
3,182,656	+				+0.8
3,182,657	-				+0.1
3,182,657	-				-0.2
3,182,657	-				-1.2
3,182,657	-				-2.6
3,182,657	-				-0.4
3,182,657	-				+0.1
3,182,660	+				-1.9
3,182,732	+		Pf1N1B4_2836	0.19	-0.7
3,182,732	+		Pf1N1B4_2836	0.19	+0.3
3,182,732	+		Pf1N1B4_2836	0.19	+0.0
3,182,732	+		Pf1N1B4_2836	0.19	+0.5
3,182,732	+		Pf1N1B4_2836	0.19	-1.7
3,182,732	+				+1.1
3,182,732	+		Pf1N1B4_2836	0.19	+0.4
3,182,733	-		Pf1N1B4_2836	0.19	-1.0
3,182,733	-		Pf1N1B4_2836	0.19	-0.3
3,182,733	-		Pf1N1B4_2836	0.19	-0.2
3,182,733	-		Pf1N1B4_2836	0.19	-0.7
3,182,733	-		Pf1N1B4_2836	0.19	+0.1
3,182,733	-		Pf1N1B4_2836	0.19	+0.6
3,182,733	-		Pf1N1B4_2836	0.19	+1.0
3,182,733	-		Pf1N1B4_2836	0.19	+0.0
3,182,733	-		Pf1N1B4_2836	0.19	+0.1
3,182,733	-				+0.7
3,182,733	-		Pf1N1B4_2836	0.19	+0.1
3,182,733	-		Pf1N1B4_2836	0.19	-0.9
3,182,733	-		Pf1N1B4_2836	0.19	-1.2
3,182,733	-		Pf1N1B4_2836	0.19	-0.3
3,182,803	+		Pf1N1B4_2836	0.29	+0.1
3,182,804	-		Pf1N1B4_2836	0.29	-0.9
3,182,804	-		Pf1N1B4_2836	0.29	+2.1
3,182,804	-		Pf1N1B4_2836	0.29	-1.7
3,182,804	-		Pf1N1B4_2836	0.29	+0.1
3,182,804	-		Pf1N1B4_2836	0.29	-1.0