Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1439
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,649,979 | - | +0.4 | |||
1,650,069 | - | +0.4 | |||
1,650,096 | - | Pf1N1B4_1438 | 0.14 | +0.0 | |
1,650,626 | - | +0.2 | |||
1,650,699 | + | Pf1N1B4_1439 | 0.16 | +0.4 | |
1,650,919 | + | Pf1N1B4_1439 | 0.38 | +0.5 | |
1,650,920 | - | +2.9 | |||
1,650,920 | - | Pf1N1B4_1439 | 0.38 | +0.4 | |
1,650,920 | - | Pf1N1B4_1439 | 0.38 | +0.4 | |
1,650,920 | - | Pf1N1B4_1439 | 0.38 | +1.4 | |
1,651,051 | + | Pf1N1B4_1439 | 0.51 | -1.5 | |
1,651,052 | + | Pf1N1B4_1439 | 0.52 | +0.1 | |
1,651,052 | + | Pf1N1B4_1439 | 0.52 | -0.2 | |
1,651,053 | - | Pf1N1B4_1439 | 0.52 | +0.9 | |
1,651,053 | - | Pf1N1B4_1439 | 0.52 | -0.5 | |
1,651,058 | - | Pf1N1B4_1439 | 0.52 | +0.8 | |
1,651,058 | - | Pf1N1B4_1439 | 0.52 | -0.5 | |
1,651,058 | - | Pf1N1B4_1439 | 0.52 | -1.5 | |
1,651,164 | + | Pf1N1B4_1439 | 0.63 | +0.4 | |
1,651,165 | - | Pf1N1B4_1439 | 0.63 | +0.2 | |
1,651,263 | - | +0.4 | |||
1,651,318 | + | Pf1N1B4_1439 | 0.78 | +0.7 | |
1,651,319 | - | Pf1N1B4_1439 | 0.78 | +0.4 | |
1,651,342 | - | Pf1N1B4_1439 | 0.81 | +0.8 |
Or see this region's nucleotide sequence