Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1004

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,137,997	-		Pf1N1B4_1002	0.84	-0.8
1,138,005	+		Pf1N1B4_1002	0.85	-0.5
1,138,005	+		Pf1N1B4_1002	0.85	+0.3
1,138,006	-		Pf1N1B4_1002	0.85	+0.6
1,138,021	-		Pf1N1B4_1002	0.86	-1.4
1,138,053	+		Pf1N1B4_1002	0.89	+0.7
1,138,053	+		Pf1N1B4_1002	0.89	-0.8
1,138,053	+		Pf1N1B4_1002	0.89	+3.7
1,138,054	-		Pf1N1B4_1002	0.90	+0.1
1,138,078	+				+0.6
1,138,078	+				+1.6
1,138,110	+				+1.7
1,138,157	+				-0.4
1,138,157	+				-0.5
1,138,170	-				-1.2
1,138,314	+				+1.2
1,138,314	+				-0.0
1,138,343	+				-0.6
1,138,486	+				-0.8
1,138,486	+				-0.2
1,138,486	+				+0.5
1,138,486	+				-0.1
1,138,486	+				+1.2
1,138,487	-				-1.5
1,138,487	-				+0.7
1,138,487	-				+0.6
1,138,487	-				-1.2
1,138,565	+				+0.6
1,138,565	+		Pf1N1B4_1003	0.18	+0.8
1,138,566	-		Pf1N1B4_1003	0.18	-0.8
1,138,573	+		Pf1N1B4_1003	0.22	+0.3
1,138,650	+		Pf1N1B4_1003	0.59	+0.5
1,138,650	+		Pf1N1B4_1003	0.59	+1.0
1,138,651	-		Pf1N1B4_1003	0.59	-0.1
1,138,651	-				+2.2
1,138,651	-		Pf1N1B4_1003	0.59	-0.2
1,138,651	-		Pf1N1B4_1003	0.59	-0.4
1,138,834	+				-0.4
1,138,834	+				-0.6
1,138,834	+				-0.8
1,138,834	+				-0.8
1,138,835	-				-0.2
1,138,835	-				-0.3
1,138,835	-				-1.2
1,138,835	-				-0.3
1,138,909	-				-0.8
1,139,211	+		Pf1N1B4_1004	0.24	-0.0
1,139,212	-		Pf1N1B4_1004	0.24	-1.7
1,139,212	-		Pf1N1B4_1004	0.24	-0.1
1,139,212	-		Pf1N1B4_1004	0.24	-2.4
1,139,224	-		Pf1N1B4_1004	0.26	+1.2
1,139,306	+		Pf1N1B4_1004	0.34	-0.8
1,139,306	+		Pf1N1B4_1004	0.34	-0.8
1,139,307	-		Pf1N1B4_1004	0.34	-0.8
1,139,307	-		Pf1N1B4_1004	0.34	+0.9
1,139,307	-		Pf1N1B4_1004	0.34	-1.0
1,139,489	+		Pf1N1B4_1004	0.53	+1.2
1,139,490	-		Pf1N1B4_1004	0.53	-1.7
1,139,490	-		Pf1N1B4_1004	0.53	-0.9
1,139,493	+		Pf1N1B4_1004	0.53	-0.4
1,139,760	+		Pf1N1B4_1004	0.81	-2.3
1,139,994	-				-0.2
1,140,020	-				+0.0
1,140,020	-				+0.7
1,140,020	-				-0.8
1,140,020	-				-0.1
1,140,036	-				+1.5
1,140,036	-				-0.8
1,140,036	-				+0.3
1,140,084	-				+2.7
1,140,100	+				+1.2
1,140,203	-				-1.2
1,140,229	-				-1.2
1,140,229	-				-0.3
1,140,229	-				-0.2
1,140,259	-				-0.8
1,140,259	-				-0.7
1,140,264	+				+1.6
1,140,312	+				-1.4
1,140,312	+				+1.2
1,140,313	-				-1.8
1,140,330	-		Pf1N1B4_1005	0.12	-0.7
1,140,415	-		Pf1N1B4_1005	0.36	-0.1
1,140,593	+		Pf1N1B4_1005	0.84	+0.2
1,140,841	+				-1.4
1,140,841	+		Pf1N1B4_1006	0.19	+0.3
1,140,842	-		Pf1N1B4_1006	0.19	+1.2
1,140,842	-		Pf1N1B4_1006	0.19	+0.2
1,140,922	+		Pf1N1B4_1006	0.28	-0.1
1,140,923	-		Pf1N1B4_1006	0.28	-0.9
1,140,923	-		Pf1N1B4_1006	0.28	-0.3
1,140,923	-		Pf1N1B4_1006	0.28	+0.2
1,140,940	+		Pf1N1B4_1006	0.30	+2.2
1,140,940	+		Pf1N1B4_1006	0.30	-0.2
1,140,940	+		Pf1N1B4_1006	0.30	-1.0
1,140,940	+		Pf1N1B4_1006	0.30	+0.2