Strain Fitness in Pantoea sp. MT58 around IAI47_18310

Experiment: copper (II) chloride 1 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 uM, anaerobic
3,894,874	+				+1.5
3,894,875	-				+0.2
3,894,911	+				-0.2
3,894,911	+				-0.0
3,894,911	+				-1.4
3,894,911	+				+1.6
3,894,911	+				-0.5
3,894,911	+				-0.5
3,894,911	+				+0.0
3,894,929	+				-0.3
3,894,929	+				-1.2
3,894,929	+				+0.0
3,894,930	-				+0.1
3,894,930	-				+0.1
3,894,931	+				-0.6
3,894,931	+				-0.2
3,894,931	+				+0.8
3,894,931	+				+0.7
3,894,931	+				-0.1
3,894,931	+				-2.0
3,894,931	+				-0.8
3,894,931	+				+0.1
3,894,932	-				-0.6
3,894,932	-				-0.4
3,894,932	-				-0.7
3,894,932	-				-0.1
3,894,932	-				-0.8
3,894,932	-				-1.3
3,894,932	-				+0.2
3,894,932	-				-0.6
3,894,932	-				-0.0
3,894,935	+				-0.3
3,894,935	+				-0.2
3,894,935	+				-0.1
3,894,935	+				+0.4
3,894,935	+				+1.2
3,894,935	+				+0.7
3,894,935	+				-1.7
3,894,935	+				-0.3
3,894,935	+				+0.3
3,894,935	+				+0.0
3,894,935	+				-0.4
3,894,936	-				-1.2
3,894,936	-				+0.3
3,894,936	-				-0.3
3,894,936	-				-0.5
3,894,936	-				-1.2
3,894,936	-				+1.2
3,894,936	-				+0.7
3,894,936	-				+0.2
3,894,936	-				-0.5
3,894,968	+				-0.7
3,894,968	+				+0.8
3,894,968	+				-0.6
3,894,969	-				-1.2
3,894,969	-				+0.6
3,894,969	-				-0.2
3,894,984	+				-2.3
3,894,984	+				-0.1
3,894,984	+				-1.5
3,894,984	+				-0.8
3,894,984	+				+0.3
3,894,984	+				-0.5
3,894,984	+				+0.6
3,894,985	-				-0.1
3,894,985	-				+1.3
3,894,985	-				-0.7
3,894,985	-				-0.6
3,894,985	-				-0.1
3,894,985	-				+0.8
3,894,985	-				+0.8
3,894,987	+				+0.3
3,894,987	+				+1.7
3,894,987	+				-0.4
3,894,987	+				-0.1
3,894,987	+				-0.4
3,894,988	-				-0.7
3,894,988	-				+0.6
3,895,213	-		IAI47_18305	0.29	+0.3
3,895,240	+		IAI47_18305	0.32	+0.9
3,895,240	+		IAI47_18305	0.32	+0.2
3,895,264	+		IAI47_18305	0.35	-0.2
3,895,264	+		IAI47_18305	0.35	+0.6
3,895,265	-		IAI47_18305	0.35	-0.8
3,895,265	-		IAI47_18305	0.35	+0.4
3,895,265	-		IAI47_18305	0.35	-0.3
3,895,291	+		IAI47_18305	0.38	-0.3
3,895,291	+		IAI47_18305	0.38	+1.5
3,895,291	+		IAI47_18305	0.38	+0.1
3,895,291	+		IAI47_18305	0.38	-0.4
3,895,292	-		IAI47_18305	0.39	-0.9
3,895,292	-		IAI47_18305	0.39	-0.9
3,895,292	-		IAI47_18305	0.39	-1.9
3,895,310	+		IAI47_18305	0.41	-0.9
3,895,311	-		IAI47_18305	0.41	+0.1
3,895,329	+		IAI47_18305	0.43	+0.2
3,895,329	+		IAI47_18305	0.43	-0.5
3,895,330	-		IAI47_18305	0.43	+0.0
3,895,401	+		IAI47_18305	0.52	+0.4
3,895,467	+		IAI47_18305	0.60	+0.9
3,895,545	+		IAI47_18305	0.69	+0.0
3,895,545	+		IAI47_18305	0.69	-0.8
3,895,545	+		IAI47_18305	0.69	+0.5
3,895,545	+		IAI47_18305	0.69	+0.5
3,895,545	+		IAI47_18305	0.69	+0.7
3,895,545	+		IAI47_18305	0.69	-0.6
3,895,545	+		IAI47_18305	0.69	-0.1
3,895,545	+		IAI47_18305	0.69	+0.1
3,895,545	+		IAI47_18305	0.69	-0.8
3,895,546	-		IAI47_18305	0.69	-0.1
3,895,546	-		IAI47_18305	0.69	+0.2
3,895,546	-		IAI47_18305	0.69	+0.5
3,895,546	-		IAI47_18305	0.69	-0.8
3,895,546	-		IAI47_18305	0.69	-0.3
3,895,546	-		IAI47_18305	0.69	+0.1
3,895,546	-		IAI47_18305	0.69	+0.2
3,895,546	-		IAI47_18305	0.69	-0.2
3,895,546	-		IAI47_18305	0.69	+0.4
3,895,551	+		IAI47_18305	0.70	-0.2
3,895,551	+		IAI47_18305	0.70	+1.7
3,895,551	+		IAI47_18305	0.70	+0.2
3,895,551	+		IAI47_18305	0.70	-0.0
3,895,551	+		IAI47_18305	0.70	+0.2
3,895,552	-		IAI47_18305	0.70	-0.8
3,895,552	-		IAI47_18305	0.70	+1.0
3,895,581	-		IAI47_18305	0.73	-1.1
3,895,581	-		IAI47_18305	0.73	+0.0
3,895,588	+		IAI47_18305	0.74	+0.2
3,895,588	+		IAI47_18305	0.74	-0.3
3,895,588	+		IAI47_18305	0.74	-1.5
3,895,589	-		IAI47_18305	0.74	-0.3
3,895,589	-		IAI47_18305	0.74	-0.4
3,895,589	-		IAI47_18305	0.74	-1.0
3,895,589	-		IAI47_18305	0.74	+0.5
3,895,589	-		IAI47_18305	0.74	-0.4
3,895,589	-		IAI47_18305	0.74	+0.7
3,895,589	-		IAI47_18305	0.74	+0.2
3,895,589	-		IAI47_18305	0.74	-0.6
3,895,704	+		IAI47_18305	0.88	+0.4
3,895,704	+		IAI47_18305	0.88	+0.6
3,895,705	-		IAI47_18305	0.88	-0.4
3,895,714	+		IAI47_18305	0.89	+0.1
3,895,726	+				+0.3
3,895,726	+				+0.2
3,895,726	+				-0.2
3,895,727	-				+0.6
3,895,727	-				+0.1
3,895,727	-				+1.2
3,895,801	+				-0.3
3,895,802	-				-0.8
3,895,836	+				-0.8
3,895,836	+				-1.3
3,895,837	-				-0.8
3,895,855	+				-0.2
3,895,855	+				-1.3
3,895,855	+				-0.3
3,895,855	+				+1.3
3,895,856	-				-0.1
3,895,856	-				-2.9
3,896,024	+				+0.0
3,896,024	+				-1.9
3,896,024	+				-0.3
3,896,025	-				+0.4
3,896,025	-				-1.2
3,896,025	-				+0.2
3,896,025	-				+0.1
3,896,045	+				-0.7
3,896,045	+				-1.5
3,896,045	+				-0.4
3,896,046	-				-0.6
3,896,046	-				-0.4
3,896,046	-				-2.0
3,896,050	+				-0.3
3,896,050	+				-2.0
3,896,050	+				-1.2
3,896,050	+				+0.3
3,896,050	+				-0.1
3,896,050	+				-2.9
3,896,050	+				-0.5
3,896,051	-				-1.7
3,896,051	-				-1.0
3,896,051	-				-1.0
3,896,051	-				-0.3
3,896,051	-				-1.5
3,896,171	+		IAI47_18310	0.14	-1.1
3,896,171	+		IAI47_18310	0.14	-0.6
3,896,172	-		IAI47_18310	0.14	-0.4
3,896,172	-		IAI47_18310	0.14	-3.1
3,896,191	+		IAI47_18310	0.15	-0.5
3,896,191	+		IAI47_18310	0.15	+0.0
3,896,191	+		IAI47_18310	0.15	-0.4
3,896,192	-		IAI47_18310	0.15	-1.6
3,896,198	+		IAI47_18310	0.15	+0.2
3,896,198	+		IAI47_18310	0.15	-1.3
3,896,198	+		IAI47_18310	0.15	-1.0
3,896,198	+		IAI47_18310	0.15	+0.3
3,896,198	+		IAI47_18310	0.15	+0.2
3,896,198	+		IAI47_18310	0.15	-0.3
3,896,198	+		IAI47_18310	0.15	+0.9
3,896,198	+		IAI47_18310	0.15	-0.8
3,896,198	+		IAI47_18310	0.15	-0.6
3,896,199	-		IAI47_18310	0.15	-1.6
3,896,199	-		IAI47_18310	0.15	-1.7
3,896,199	-		IAI47_18310	0.15	-0.3
3,896,199	-		IAI47_18310	0.15	-1.0
3,896,199	-		IAI47_18310	0.15	-3.0
3,896,199	-		IAI47_18310	0.15	-1.1
3,896,199	-		IAI47_18310	0.15	-1.0
3,896,199	-		IAI47_18310	0.15	-1.9
3,896,199	-		IAI47_18310	0.15	-0.9
3,896,199	-		IAI47_18310	0.15	+0.1
3,896,199	-		IAI47_18310	0.15	-0.2
3,896,199	-		IAI47_18310	0.15	+0.1
3,896,199	-		IAI47_18310	0.15	-0.3
3,896,199	-		IAI47_18310	0.15	-2.2
3,896,272	+		IAI47_18310	0.18	-0.4
3,896,272	+		IAI47_18310	0.18	+0.2
3,896,273	-		IAI47_18310	0.18	-0.3
3,896,337	-		IAI47_18310	0.21	-1.3
3,896,479	-		IAI47_18310	0.28	-2.2
3,896,506	+		IAI47_18310	0.29	-0.3
3,896,506	+		IAI47_18310	0.29	+0.3
3,896,506	+		IAI47_18310	0.29	-1.9
3,896,507	-		IAI47_18310	0.29	+0.0
3,896,556	-		IAI47_18310	0.31	+0.9
3,896,556	-		IAI47_18310	0.31	-0.7
3,896,556	-		IAI47_18310	0.31	+0.3
3,896,556	-		IAI47_18310	0.31	+0.6
3,896,556	-		IAI47_18310	0.31	-2.0
3,896,587	+		IAI47_18310	0.32	+0.0
3,896,587	+		IAI47_18310	0.32	+0.1
3,896,587	+		IAI47_18310	0.32	-0.0
3,896,587	+		IAI47_18310	0.32	-0.8
3,896,587	+		IAI47_18310	0.32	-0.7
3,896,587	+		IAI47_18310	0.32	-0.7
3,896,587	+		IAI47_18310	0.32	-1.8
3,896,587	+		IAI47_18310	0.32	-0.7
3,896,587	+		IAI47_18310	0.32	-2.3
3,896,588	-		IAI47_18310	0.32	+0.5
3,896,588	-		IAI47_18310	0.32	+0.3
3,896,588	-		IAI47_18310	0.32	-0.0
3,896,588	-		IAI47_18310	0.32	-0.7
3,896,588	-		IAI47_18310	0.32	-0.0
3,896,588	-		IAI47_18310	0.32	-1.5
3,896,588	-		IAI47_18310	0.32	-0.8
3,896,644	+		IAI47_18310	0.35	-0.7
3,896,644	+		IAI47_18310	0.35	-0.2
3,896,644	+		IAI47_18310	0.35	-1.0
3,896,644	+		IAI47_18310	0.35	+0.5
3,896,645	-		IAI47_18310	0.35	-1.0
3,896,645	-		IAI47_18310	0.35	-0.7
3,896,645	-		IAI47_18310	0.35	+0.5
3,896,645	-		IAI47_18310	0.35	-2.7
3,896,654	+		IAI47_18310	0.35	-1.5
3,896,654	+		IAI47_18310	0.35	-0.7
3,896,660	+		IAI47_18310	0.35	-1.9
3,896,660	+		IAI47_18310	0.35	-0.5
3,896,660	+		IAI47_18310	0.35	+0.2
3,896,660	+		IAI47_18310	0.35	-0.5
3,896,661	-		IAI47_18310	0.36	-0.5
3,896,661	-		IAI47_18310	0.36	-0.2
3,896,661	-		IAI47_18310	0.36	-0.3
3,896,726	+		IAI47_18310	0.38	-1.5
3,896,726	+		IAI47_18310	0.38	-0.3
3,896,726	+		IAI47_18310	0.38	-1.6
3,896,726	+		IAI47_18310	0.38	-1.0
3,896,781	-		IAI47_18310	0.41	-0.9
3,896,894	-		IAI47_18310	0.46	-0.8
3,896,957	+		IAI47_18310	0.49	-0.7
3,896,957	+		IAI47_18310	0.49	-1.0
3,896,957	+		IAI47_18310	0.49	-1.0
3,896,957	+		IAI47_18310	0.49	-1.3
3,896,958	-		IAI47_18310	0.49	+0.7
3,896,958	-		IAI47_18310	0.49	-0.3
3,896,958	-		IAI47_18310	0.49	-0.7
3,896,958	-		IAI47_18310	0.49	-1.3
3,896,958	-		IAI47_18310	0.49	-0.8
3,896,958	-		IAI47_18310	0.49	+0.3
3,896,958	-		IAI47_18310	0.49	-1.6
3,896,958	-		IAI47_18310	0.49	-1.1
3,897,242	+		IAI47_18310	0.61	-1.8
3,897,242	+		IAI47_18310	0.61	+0.3
3,897,242	+		IAI47_18310	0.61	-2.3
3,897,242	+		IAI47_18310	0.61	+0.6
3,897,242	+		IAI47_18310	0.61	+0.7
3,897,243	-		IAI47_18310	0.61	-1.7
3,897,243	-		IAI47_18310	0.61	-0.6
3,897,305	+		IAI47_18310	0.64	-0.6
3,897,305	+		IAI47_18310	0.64	-1.1
3,897,305	+		IAI47_18310	0.64	-1.9
3,897,305	+		IAI47_18310	0.64	-1.0
3,897,305	+		IAI47_18310	0.64	-1.0
3,897,305	+		IAI47_18310	0.64	-1.4
3,897,306	-		IAI47_18310	0.64	-0.6
3,897,306	-		IAI47_18310	0.64	-1.7
3,897,306	-		IAI47_18310	0.64	-2.3
3,897,308	+		IAI47_18310	0.64	-2.1
3,897,308	+		IAI47_18310	0.64	-1.0
3,897,308	+		IAI47_18310	0.64	-0.6
3,897,308	+		IAI47_18310	0.64	-0.6
3,897,308	+		IAI47_18310	0.64	-0.8
3,897,308	+		IAI47_18310	0.64	-0.1
3,897,308	+		IAI47_18310	0.64	-0.0
3,897,308	+		IAI47_18310	0.64	+0.6
3,897,309	-		IAI47_18310	0.64	-0.9
3,897,309	-		IAI47_18310	0.64	+0.7
3,897,309	-		IAI47_18310	0.64	-1.0
3,897,309	-		IAI47_18310	0.64	-1.4
3,897,309	-		IAI47_18310	0.64	+0.5
3,897,309	-		IAI47_18310	0.64	-0.2
3,897,310	-		IAI47_18310	0.64	+0.3
3,897,310	-		IAI47_18310	0.64	+0.3
3,897,397	+		IAI47_18310	0.68	-0.8
3,897,397	+		IAI47_18310	0.68	-0.3
3,897,397	+		IAI47_18310	0.68	-0.7
3,897,397	+		IAI47_18310	0.68	-1.7
3,897,397	+		IAI47_18310	0.68	-2.2
3,897,397	+		IAI47_18310	0.68	-0.2
3,897,397	+		IAI47_18310	0.68	-0.7
3,897,398	-		IAI47_18310	0.68	-0.1
3,897,398	-		IAI47_18310	0.68	-0.5
3,897,398	-		IAI47_18310	0.68	-0.0
3,897,398	-		IAI47_18310	0.68	-1.5
3,897,398	-		IAI47_18310	0.68	-1.2
3,897,439	+		IAI47_18310	0.70	-1.3
3,897,439	+		IAI47_18310	0.70	-0.3
3,897,440	-		IAI47_18310	0.70	-1.3
3,897,507	+		IAI47_18310	0.73	+2.7
3,897,553	+		IAI47_18310	0.75	-0.6
3,897,553	+		IAI47_18310	0.75	-1.0
3,897,553	+		IAI47_18310	0.75	-1.5
3,897,553	+		IAI47_18310	0.75	+0.2
3,897,554	-		IAI47_18310	0.75	-0.8
3,897,625	+		IAI47_18310	0.78	+0.2
3,897,625	+		IAI47_18310	0.78	-0.7
3,897,625	+		IAI47_18310	0.78	-1.1
3,897,626	-		IAI47_18310	0.78	-0.3
3,897,626	-		IAI47_18310	0.78	-0.7
3,897,626	-		IAI47_18310	0.78	-2.1
3,897,626	-		IAI47_18310	0.78	-0.2
3,897,626	-		IAI47_18310	0.78	+0.0
3,897,653	+		IAI47_18310	0.79	+0.2
3,897,653	+		IAI47_18310	0.79	-0.0
3,897,653	+		IAI47_18310	0.79	+0.8
3,897,653	+		IAI47_18310	0.79	-0.7
3,897,654	-		IAI47_18310	0.79	+0.8
3,897,654	-		IAI47_18310	0.79	+0.3
3,897,716	+		IAI47_18310	0.82	-0.8
3,897,716	+		IAI47_18310	0.82	-0.6
3,897,717	-		IAI47_18310	0.82	-0.1
3,897,717	-		IAI47_18310	0.82	-0.3
3,897,734	+		IAI47_18310	0.83	+0.2
3,897,757	+		IAI47_18310	0.84	-1.1
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3,898,835	-		IAI47_18315	0.61	-0.9
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3,898,842	+		IAI47_18315	0.62	-1.8
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3,899,061	+		IAI47_18315	0.85	+1.1
3,899,061	+		IAI47_18315	0.85	-0.4
3,899,112	-				-0.7