Strain Fitness in Pantoea sp. MT58 around IAI47_16215

Experiment: copper (II) chloride 1 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 uM, anaerobic
3,433,162	+				-1.8
3,433,163	-				-2.4
3,433,170	+				-1.8
3,433,170	+				-0.9
3,433,170	+				-1.7
3,433,170	+				-1.1
3,433,170	+				-2.3
3,433,171	-				-3.1
3,433,225	+				-1.3
3,433,225	+				-1.6
3,433,225	+				-2.5
3,433,225	+				-1.0
3,433,226	-				-2.6
3,433,226	-				-3.5
3,433,226	-				-2.4
3,433,254	+				-1.8
3,433,254	+				-2.4
3,433,255	-				-1.1
3,433,255	-				-1.6
3,433,255	-				-0.9
3,433,255	-				-2.7
3,433,255	-				-0.7
3,433,255	-				-3.0
3,433,339	+		IAI47_16210	0.17	-0.1
3,433,414	-		IAI47_16210	0.25	-1.4
3,433,468	+		IAI47_16210	0.31	-1.6
3,433,468	+		IAI47_16210	0.31	-2.8
3,433,468	+		IAI47_16210	0.31	-4.1
3,433,469	-		IAI47_16210	0.31	-1.0
3,433,469	-		IAI47_16210	0.31	-0.8
3,433,469	-		IAI47_16210	0.31	-0.3
3,433,469	-		IAI47_16210	0.31	+0.1
3,433,513	+		IAI47_16210	0.35	-1.7
3,433,514	-		IAI47_16210	0.35	-1.1
3,433,514	-		IAI47_16210	0.35	-0.8
3,433,514	-		IAI47_16210	0.35	-0.5
3,433,514	-		IAI47_16210	0.35	-3.1
3,433,514	-		IAI47_16210	0.35	-0.5
3,433,514	-		IAI47_16210	0.35	-3.1
3,433,530	+		IAI47_16210	0.37	-1.7
3,433,546	+		IAI47_16210	0.39	-2.7
3,433,585	-		IAI47_16210	0.43	-1.8
3,433,690	+		IAI47_16210	0.54	-1.9
3,433,690	+		IAI47_16210	0.54	-1.0
3,433,690	+		IAI47_16210	0.54	-0.5
3,433,690	+		IAI47_16210	0.54	-0.6
3,433,690	+		IAI47_16210	0.54	-3.2
3,433,691	-		IAI47_16210	0.55	-0.8
3,433,691	-		IAI47_16210	0.55	-0.6
3,433,691	-		IAI47_16210	0.55	-1.7
3,433,695	+		IAI47_16210	0.55	-2.4
3,433,695	+		IAI47_16210	0.55	-2.0
3,433,696	-		IAI47_16210	0.55	+0.3
3,433,696	-		IAI47_16210	0.55	-2.9
3,433,696	-		IAI47_16210	0.55	-1.1
3,433,696	-		IAI47_16210	0.55	-1.1
3,433,806	-		IAI47_16210	0.67	-1.5
3,433,806	-		IAI47_16210	0.67	-2.8
3,433,846	+		IAI47_16210	0.71	-0.6
3,433,846	+		IAI47_16210	0.71	-2.5
3,433,846	+		IAI47_16210	0.71	-2.0
3,433,846	+		IAI47_16210	0.71	-0.8
3,433,846	+		IAI47_16210	0.71	+0.7
3,433,847	-		IAI47_16210	0.71	-2.4
3,433,847	-		IAI47_16210	0.71	-1.9
3,433,847	-		IAI47_16210	0.71	-1.9
3,433,847	-		IAI47_16210	0.71	-1.4
3,433,847	-		IAI47_16210	0.71	-1.3
3,433,847	-		IAI47_16210	0.71	+1.1
3,433,917	+		IAI47_16210	0.79	-2.0
3,433,917	+		IAI47_16210	0.79	-2.2
3,433,917	+		IAI47_16210	0.79	-0.5
3,433,917	+		IAI47_16210	0.79	-3.7
3,433,917	+		IAI47_16210	0.79	-0.3
3,433,918	-		IAI47_16210	0.79	+0.3
3,433,918	-		IAI47_16210	0.79	-2.8
3,433,918	-		IAI47_16210	0.79	-2.5
3,433,924	+		IAI47_16210	0.80	-2.2
3,433,924	+		IAI47_16210	0.80	-1.8
3,433,924	+		IAI47_16210	0.80	-1.3
3,433,924	+		IAI47_16210	0.80	-1.2
3,433,924	+		IAI47_16210	0.80	-1.2
3,433,925	-		IAI47_16210	0.80	-2.3
3,433,925	-		IAI47_16210	0.80	-1.4
3,433,925	-		IAI47_16210	0.80	-1.9
3,434,117	+				-1.8
3,434,117	+				-3.2
3,434,117	+				-1.7
3,434,118	-				-2.4
3,434,118	-				+0.3
3,434,118	-				-2.1
3,434,118	-				-1.9
3,434,118	-				-2.8
3,434,118	-				-2.1
3,434,118	-				-1.7
3,434,142	+				-2.6
3,434,143	-				+0.3
3,434,143	-				-0.0
3,434,143	-				-1.3
3,434,195	+				-2.1
3,434,196	-				+0.4
3,434,196	-				-1.0
3,434,196	-				-1.7
3,434,226	-				-1.1
3,434,226	-				+0.3
3,434,226	-				-1.4
3,434,229	-				-0.4
3,434,237	+				-2.0
3,434,237	+				-1.8
3,434,237	+				-2.3
3,434,238	-				-2.1
3,434,271	+				-1.2
3,434,271	+				-1.7
3,434,271	+				-1.8
3,434,272	-				-3.3
3,434,273	+				-2.9
3,434,273	+				-1.1
3,434,274	-				-0.5
3,434,274	-				-1.5
3,434,274	-				-0.4
3,434,274	-				-1.9
3,434,313	+				-1.4
3,434,313	+				-1.3
3,434,313	+				-1.8
3,434,345	+				-1.9
3,434,346	-				-0.7
3,434,346	-				-0.9
3,434,346	-				-1.4
3,434,424	+		IAI47_16215	0.13	-0.8
3,434,424	+		IAI47_16215	0.13	-0.2
3,434,424	+		IAI47_16215	0.13	+1.1
3,434,424	+		IAI47_16215	0.13	-2.8
3,434,424	+		IAI47_16215	0.13	-1.6
3,434,424	+		IAI47_16215	0.13	-0.9
3,434,425	-		IAI47_16215	0.13	-2.7
3,434,425	-		IAI47_16215	0.13	-1.3
3,434,425	-		IAI47_16215	0.13	-1.6
3,434,425	-		IAI47_16215	0.13	-1.3
3,434,484	+		IAI47_16215	0.15	-0.5
3,434,484	+		IAI47_16215	0.15	-1.6
3,434,535	+		IAI47_16215	0.17	-2.3
3,434,652	+		IAI47_16215	0.22	-1.0
3,434,652	+		IAI47_16215	0.22	-1.2
3,434,653	-		IAI47_16215	0.22	-0.7
3,434,760	+		IAI47_16215	0.26	-0.8
3,434,765	+		IAI47_16215	0.26	-1.8
3,434,766	-		IAI47_16215	0.26	-0.3
3,434,813	+		IAI47_16215	0.28	-0.5
3,434,814	-		IAI47_16215	0.28	-2.7
3,434,814	-		IAI47_16215	0.28	-1.0
3,434,814	-		IAI47_16215	0.28	-1.1
3,434,814	-		IAI47_16215	0.28	-1.3
3,434,814	-		IAI47_16215	0.28	-0.8
3,434,816	+		IAI47_16215	0.28	-1.8
3,434,817	-		IAI47_16215	0.28	-2.0
3,434,817	-		IAI47_16215	0.28	-1.3
3,434,817	-		IAI47_16215	0.28	-1.8
3,434,888	+		IAI47_16215	0.31	-0.4
3,434,888	+		IAI47_16215	0.31	-1.9
3,434,888	+		IAI47_16215	0.31	-2.0
3,434,888	+		IAI47_16215	0.31	-1.3
3,434,888	+		IAI47_16215	0.31	-2.5
3,434,889	-		IAI47_16215	0.31	+0.5
3,434,948	+		IAI47_16215	0.34	-1.9
3,434,948	+		IAI47_16215	0.34	-0.5
3,434,948	+		IAI47_16215	0.34	-2.2
3,434,948	+		IAI47_16215	0.34	-3.2
3,434,948	+		IAI47_16215	0.34	+1.9
3,434,949	-		IAI47_16215	0.34	-1.8
3,434,949	-		IAI47_16215	0.34	-4.2
3,434,957	-		IAI47_16215	0.34	-2.4
3,434,983	-		IAI47_16215	0.35	-2.5
3,435,025	+		IAI47_16215	0.37	-2.2
3,435,025	+		IAI47_16215	0.37	-1.0
3,435,026	-		IAI47_16215	0.37	-2.0
3,435,026	-		IAI47_16215	0.37	-1.0
3,435,026	-		IAI47_16215	0.37	-1.9
3,435,026	-		IAI47_16215	0.37	-2.2
3,435,026	-		IAI47_16215	0.37	-2.3
3,435,033	+		IAI47_16215	0.37	+2.6
3,435,066	+		IAI47_16215	0.39	-1.8
3,435,067	-		IAI47_16215	0.39	-2.5
3,435,094	-		IAI47_16215	0.40	-2.0
3,435,094	-		IAI47_16215	0.40	-1.1
3,435,094	-		IAI47_16215	0.40	-2.8
3,435,246	+		IAI47_16215	0.46	-0.8
3,435,246	+		IAI47_16215	0.46	-2.2
3,435,247	-		IAI47_16215	0.46	-2.0
3,435,247	-		IAI47_16215	0.46	+0.4
3,435,247	-		IAI47_16215	0.46	-0.6
3,435,264	+		IAI47_16215	0.47	-2.2
3,435,264	+		IAI47_16215	0.47	+0.5
3,435,265	-		IAI47_16215	0.47	-2.3
3,435,265	-		IAI47_16215	0.47	-2.1
3,435,265	-		IAI47_16215	0.47	-2.1
3,435,265	-		IAI47_16215	0.47	-2.7
3,435,300	+		IAI47_16215	0.48	-2.0
3,435,300	+		IAI47_16215	0.48	-2.6
3,435,306	+		IAI47_16215	0.48	-2.0
3,435,307	-		IAI47_16215	0.48	-2.8
3,435,376	+		IAI47_16215	0.51	-3.2
3,435,377	-		IAI47_16215	0.51	-0.3
3,435,405	+		IAI47_16215	0.52	-2.5
3,435,406	-		IAI47_16215	0.52	-1.7
3,435,443	+		IAI47_16215	0.54	-1.6
3,435,443	+		IAI47_16215	0.54	-1.4
3,435,444	-		IAI47_16215	0.54	-1.4
3,435,444	-		IAI47_16215	0.54	-2.0
3,435,444	-		IAI47_16215	0.54	-1.1
3,435,444	-		IAI47_16215	0.54	-2.1
3,435,512	+		IAI47_16215	0.57	-0.4
3,435,512	+		IAI47_16215	0.57	-3.1
3,435,512	+		IAI47_16215	0.57	-2.4
3,435,513	-		IAI47_16215	0.57	+0.8
3,435,636	+		IAI47_16215	0.62	-2.5
3,435,637	-		IAI47_16215	0.62	-1.5
3,435,639	+		IAI47_16215	0.62	-1.9
3,435,639	+		IAI47_16215	0.62	-1.1
3,435,639	+		IAI47_16215	0.62	-2.0
3,435,639	+		IAI47_16215	0.62	-1.1
3,435,640	-		IAI47_16215	0.62	-2.8
3,435,640	-		IAI47_16215	0.62	-0.2
3,435,640	-		IAI47_16215	0.62	-2.0
3,435,640	-		IAI47_16215	0.62	-0.9
3,435,640	-		IAI47_16215	0.62	-0.2
3,435,640	-		IAI47_16215	0.62	-0.8
3,435,640	-		IAI47_16215	0.62	-3.0
3,435,640	-		IAI47_16215	0.62	-0.2
3,435,640	-		IAI47_16215	0.62	-1.1
3,435,648	+		IAI47_16215	0.62	-1.8
3,435,648	+		IAI47_16215	0.62	-0.7
3,435,661	+		IAI47_16215	0.63	-2.9
3,435,661	+		IAI47_16215	0.63	-2.8
3,435,662	-		IAI47_16215	0.63	-1.1
3,435,803	+		IAI47_16215	0.68	-1.2
3,435,803	+		IAI47_16215	0.68	-2.6
3,435,803	+		IAI47_16215	0.68	-2.0
3,435,827	+		IAI47_16215	0.69	-0.9
3,435,827	+		IAI47_16215	0.69	+0.0
3,435,827	+		IAI47_16215	0.69	-2.0
3,435,828	-		IAI47_16215	0.70	+0.1
3,435,828	-		IAI47_16215	0.70	-2.6
3,435,828	-		IAI47_16215	0.70	-3.1
3,435,879	+		IAI47_16215	0.72	-1.0
3,435,879	+		IAI47_16215	0.72	-2.2
3,435,880	-		IAI47_16215	0.72	-2.7
3,435,881	+		IAI47_16215	0.72	-0.8
3,435,882	-		IAI47_16215	0.72	-2.5
3,435,882	-		IAI47_16215	0.72	-1.6
3,435,882	-		IAI47_16215	0.72	-1.5
3,435,882	-		IAI47_16215	0.72	-2.2
3,435,882	-		IAI47_16215	0.72	-2.0
3,435,882	-		IAI47_16215	0.72	-2.2
3,435,892	+		IAI47_16215	0.72	-0.4
3,435,892	+		IAI47_16215	0.72	-1.0
3,435,893	-		IAI47_16215	0.72	-2.2
3,435,893	-		IAI47_16215	0.72	-3.0
3,435,893	-		IAI47_16215	0.72	-1.4
3,435,979	+		IAI47_16215	0.76	-1.6
3,435,979	+		IAI47_16215	0.76	-1.4
3,435,980	-		IAI47_16215	0.76	-1.5
3,435,980	-		IAI47_16215	0.76	-2.2
3,435,980	-		IAI47_16215	0.76	-0.5
3,435,980	-		IAI47_16215	0.76	-3.2
3,436,009	-		IAI47_16215	0.77	-1.4
3,436,081	-		IAI47_16215	0.80	-1.9
3,436,081	-		IAI47_16215	0.80	+0.2
3,436,100	+		IAI47_16215	0.81	-0.2
3,436,108	+		IAI47_16215	0.81	-0.6
3,436,108	+		IAI47_16215	0.81	-2.0
3,436,212	+		IAI47_16215	0.85	-0.7
3,436,212	+		IAI47_16215	0.85	-2.2
3,436,212	+		IAI47_16215	0.85	-1.9
3,436,213	-		IAI47_16215	0.85	-2.8
3,436,213	-		IAI47_16215	0.85	-4.0
3,436,213	-		IAI47_16215	0.85	-2.2
3,436,213	-		IAI47_16215	0.85	-2.2
3,436,276	+		IAI47_16215	0.88	-0.8
3,436,276	+		IAI47_16215	0.88	-2.4
3,436,276	+		IAI47_16215	0.88	-0.8
3,436,276	+		IAI47_16215	0.88	-1.9
3,436,277	-		IAI47_16215	0.88	-2.1
3,436,389	+				-2.5
3,436,389	+				-0.5
3,436,390	-				-2.5
3,436,447	-				-0.8
3,436,500	+				-1.8
3,436,501	-				-1.1
3,436,501	-				-0.2
3,436,581	+				-2.7
3,436,581	+				-1.7
3,436,582	-				-1.3
3,436,582	-				-2.1
3,436,582	-				-1.6
3,436,582	-				-2.3
3,436,582	-				-2.2
3,436,582	-				-1.1
3,436,582	-				-1.3
3,436,583	+				-0.4
3,436,583	+				-2.5
3,436,583	+				-2.2
3,436,583	+				-1.0
3,436,583	+				-2.7
3,436,583	+				-3.1
3,436,583	+				-1.0
3,436,583	+				-1.4
3,436,584	-				-2.1
3,436,584	-				-1.7
3,436,584	-				-0.3
3,436,584	-				-1.9
3,436,584	-				-1.3
3,436,584	-				-1.1
3,436,584	-				-0.4
3,436,584	-				-3.0
3,436,584	-				-1.3
3,436,584	-				-2.7
3,436,584	-				-1.0
3,436,584	-				-3.1
3,436,584	-				-1.8
3,436,584	-				-1.1
3,436,626	+				-0.4
3,436,626	+				-0.7
3,436,626	+				-3.3
3,436,656	+				-1.0
3,436,657	-				-1.6
3,436,676	+		IAI47_16220	0.20	-0.8
3,436,685	+		IAI47_16220	0.33	-0.4
3,436,685	+		IAI47_16220	0.33	-1.5
3,436,686	-		IAI47_16220	0.35	-1.2
3,436,686	-		IAI47_16220	0.35	+0.9
3,436,686	-		IAI47_16220	0.35	-0.1
3,436,686	-		IAI47_16220	0.35	-1.7
3,436,697	+		IAI47_16220	0.51	-0.8
3,436,700	+		IAI47_16220	0.55	-0.7
3,436,700	+		IAI47_16220	0.55	-2.7
3,436,700	+		IAI47_16220	0.55	-1.6
3,436,700	+		IAI47_16220	0.55	-2.5
3,436,700	+		IAI47_16220	0.55	-3.5
3,436,700	+		IAI47_16220	0.55	-0.9
3,436,701	-		IAI47_16220	0.57	+0.3
3,436,701	-		IAI47_16220	0.57	+0.7
3,436,701	-		IAI47_16220	0.57	+0.7
3,436,701	-		IAI47_16220	0.57	-0.8
3,436,701	-		IAI47_16220	0.57	-1.5
3,436,701	-		IAI47_16220	0.57	+0.3
3,436,701	-		IAI47_16220	0.57	-0.3
3,436,701	-		IAI47_16220	0.57	+0.2
3,436,701	-		IAI47_16220	0.57	-0.7
3,436,732	+				-3.2
3,436,732	+				-1.8
3,436,732	+				-0.8
3,436,733	-				-0.7
3,436,733	-				-0.4
3,436,733	-				-1.3
3,436,738	+				-1.5
3,436,738	+				-0.3
3,436,738	+				-2.1
3,436,739	-				+1.4
3,436,739	-				-0.2
3,436,781	-				+0.0
3,436,781	-				+0.1
3,436,797	+				-3.2
3,436,797	+				-1.7
3,436,797	+				-3.4
3,436,798	-				-0.7
3,436,798	-				-0.4
3,436,869	+				+1.3
3,436,869	+				-0.0
3,436,915	-				-0.8
3,436,939	+				+0.1
3,436,960	+				+1.0
3,436,961	-				+0.4
3,437,012	+		IAI47_16225	0.13	-0.1
3,437,013	-		IAI47_16225	0.13	+0.7
3,437,013	-		IAI47_16225	0.13	+0.9
3,437,166	+		IAI47_16225	0.35	+0.2
3,437,166	+		IAI47_16225	0.35	-0.2
3,437,167	-		IAI47_16225	0.35	-0.0
3,437,167	-		IAI47_16225	0.35	-1.0
3,437,167	-		IAI47_16225	0.35	+1.1
3,437,167	-		IAI47_16225	0.35	-0.6
3,437,172	+		IAI47_16225	0.36	-0.2
3,437,172	+		IAI47_16225	0.36	-0.2
3,437,172	+		IAI47_16225	0.36	+0.6
3,437,172	+		IAI47_16225	0.36	+2.7
3,437,172	+		IAI47_16225	0.36	+0.8
3,437,172	+		IAI47_16225	0.36	-1.7
3,437,172	+		IAI47_16225	0.36	-0.3
3,437,172	+		IAI47_16225	0.36	+0.2
3,437,173	-		IAI47_16225	0.36	+0.9
3,437,173	-		IAI47_16225	0.36	+0.7
3,437,173	-		IAI47_16225	0.36	-1.6
3,437,173	-		IAI47_16225	0.36	+0.5
3,437,173	-		IAI47_16225	0.36	+0.6
3,437,173	-		IAI47_16225	0.36	-0.5
3,437,173	-		IAI47_16225	0.36	+0.1
3,437,173	-		IAI47_16225	0.36	-0.1
3,437,173	-		IAI47_16225	0.36	+2.1
3,437,173	-		IAI47_16225	0.36	-0.5
3,437,173	-		IAI47_16225	0.36	-0.9
3,437,173	-		IAI47_16225	0.36	+0.0
3,437,173	-		IAI47_16225	0.36	-0.4
3,437,173	-		IAI47_16225	0.36	+0.3
3,437,173	-		IAI47_16225	0.36	-0.7
3,437,173	-		IAI47_16225	0.36	-0.6
3,437,173	-		IAI47_16225	0.36	+0.4
3,437,173	-		IAI47_16225	0.36	-0.2
3,437,173	-		IAI47_16225	0.36	+0.8
3,437,173	-		IAI47_16225	0.36	+0.8
3,437,173	-		IAI47_16225	0.36	+0.6
3,437,209	-		IAI47_16225	0.41	-1.4
3,437,264	-		IAI47_16225	0.49	+0.2
3,437,292	-		IAI47_16225	0.53	-1.8
3,437,302	+		IAI47_16225	0.54	+0.9
3,437,302	+		IAI47_16225	0.54	+0.1
3,437,303	-		IAI47_16225	0.54	-0.3
3,437,303	-		IAI47_16225	0.54	+1.6
3,437,361	+		IAI47_16225	0.63	+1.0
3,437,361	+		IAI47_16225	0.63	+0.3
3,437,361	+		IAI47_16225	0.63	+0.3
3,437,362	+		IAI47_16225	0.63	+0.1
3,437,362	-		IAI47_16225	0.63	-0.4
3,437,362	-		IAI47_16225	0.63	+0.8
3,437,362	-		IAI47_16225	0.63	-0.4
3,437,362	-		IAI47_16225	0.63	+0.8
3,437,362	-		IAI47_16225	0.63	-0.3
3,437,362	-		IAI47_16225	0.63	-0.4
3,437,362	-		IAI47_16225	0.63	+1.0
3,437,364	+		IAI47_16225	0.63	+0.0
3,437,365	-		IAI47_16225	0.63	-0.1
3,437,365	-		IAI47_16225	0.63	+0.9
3,437,437	+		IAI47_16225	0.73	+1.1
3,437,438	-		IAI47_16225	0.74	-0.3
3,437,455	+		IAI47_16225	0.76	-0.9
3,437,455	+		IAI47_16225	0.76	-0.2
3,437,455	+		IAI47_16225	0.76	-0.5
3,437,456	-		IAI47_16225	0.76	+1.0
3,437,456	-		IAI47_16225	0.76	-2.2