Experiment: L-mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03635 and HSERO_RS03640 are separated by 97 nucleotides HSERO_RS03640 and HSERO_RS03645 are separated by 79 nucleotides
HSERO_RS03635: HSERO_RS03635 - D-mannose ABC transporter, substrate-binding component <small>(from data)</small>, at 793,484 to 794,434
_RS03635
HSERO_RS03640: HSERO_RS03640 - D-mannose ABC transporter, ATPase component <small>(from data)</small>, at 794,532 to 796,037
_RS03640
HSERO_RS03645: HSERO_RS03645 - D-mannose ABC transporter, permease component <small>(from data)</small>, at 796,117 to 797,136
_RS03645
Position (kb) 794
795
796
797 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1 at 793.544 kb on - strand at 793.790 kb on - strand, within HSERO_RS03635 at 793.861 kb on + strand, within HSERO_RS03635 at 793.959 kb on - strand, within HSERO_RS03635 at 794.570 kb on - strand at 794.687 kb on + strand, within HSERO_RS03640 at 794.704 kb on - strand, within HSERO_RS03640 at 794.823 kb on + strand, within HSERO_RS03640 at 794.827 kb on + strand, within HSERO_RS03640 at 795.026 kb on - strand, within HSERO_RS03640 at 795.055 kb on + strand, within HSERO_RS03640 at 795.097 kb on - strand, within HSERO_RS03640 at 795.379 kb on + strand, within HSERO_RS03640 at 795.387 kb on - strand, within HSERO_RS03640 at 795.402 kb on + strand, within HSERO_RS03640 at 795.495 kb on + strand, within HSERO_RS03640 at 795.577 kb on - strand, within HSERO_RS03640 at 795.841 kb on - strand, within HSERO_RS03640 at 795.897 kb on - strand at 795.985 kb on - strand at 796.050 kb on - strand at 796.322 kb on + strand, within HSERO_RS03645 at 796.328 kb on + strand, within HSERO_RS03645 at 796.450 kb on + strand, within HSERO_RS03645 at 796.489 kb on - strand, within HSERO_RS03645 at 796.494 kb on - strand, within HSERO_RS03645 at 796.668 kb on - strand, within HSERO_RS03645 at 796.682 kb on - strand, within HSERO_RS03645 at 796.899 kb on - strand, within HSERO_RS03645 at 796.928 kb on + strand, within HSERO_RS03645 at 796.951 kb on - strand, within HSERO_RS03645 at 796.974 kb on - strand, within HSERO_RS03645
Per-strain Table
Position Strand Gene LocusTag Fraction L-mannose (C) remove 793,544 - -6.9 793,790 - HSERO_RS03635 0.32 -3.3 793,861 + HSERO_RS03635 0.40 -2.6 793,959 - HSERO_RS03635 0.50 -4.2 794,570 - -4.5 794,687 + HSERO_RS03640 0.10 -2.4 794,704 - HSERO_RS03640 0.11 -1.6 794,823 + HSERO_RS03640 0.19 -3.2 794,827 + HSERO_RS03640 0.20 -3.8 795,026 - HSERO_RS03640 0.33 -4.2 795,055 + HSERO_RS03640 0.35 -2.4 795,097 - HSERO_RS03640 0.38 -3.7 795,379 + HSERO_RS03640 0.56 -0.9 795,387 - HSERO_RS03640 0.57 -2.1 795,402 + HSERO_RS03640 0.58 -4.1 795,495 + HSERO_RS03640 0.64 -3.5 795,577 - HSERO_RS03640 0.69 -4.2 795,841 - HSERO_RS03640 0.87 -4.5 795,897 - -4.7 795,985 - -4.1 796,050 - -5.3 796,322 + HSERO_RS03645 0.20 -3.7 796,328 + HSERO_RS03645 0.21 -4.2 796,450 + HSERO_RS03645 0.33 -3.1 796,489 - HSERO_RS03645 0.36 -1.2 796,494 - HSERO_RS03645 0.37 -3.9 796,668 - HSERO_RS03645 0.54 -0.5 796,682 - HSERO_RS03645 0.55 -3.0 796,899 - HSERO_RS03645 0.77 -4.2 796,928 + HSERO_RS03645 0.80 -2.0 796,951 - HSERO_RS03645 0.82 -5.1 796,974 - HSERO_RS03645 0.84 -1.4
Or see this region's nucleotide sequence