Experiment: L-mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03625 and HSERO_RS03630 are separated by 381 nucleotides HSERO_RS03630 and HSERO_RS03635 are separated by 62 nucleotides
HSERO_RS03625: HSERO_RS03625 - nicotinamidase-like protein, at 791,814 to 792,422
_RS03625
HSERO_RS03630: HSERO_RS03630 - fructose transporter, at 792,804 to 793,421
_RS03630
HSERO_RS03635: HSERO_RS03635 - D-mannose ABC transporter, substrate-binding component <small>(from data)</small>, at 793,484 to 794,434
_RS03635
Position (kb) 792
793
794 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1 at 791.818 kb on + strand at 791.823 kb on + strand at 791.831 kb on - strand at 791.831 kb on - strand at 791.939 kb on - strand, within HSERO_RS03625 at 792.016 kb on - strand, within HSERO_RS03625 at 792.159 kb on - strand, within HSERO_RS03625 at 792.218 kb on - strand, within HSERO_RS03625 at 792.251 kb on - strand, within HSERO_RS03625 at 792.337 kb on + strand, within HSERO_RS03625 at 792.403 kb on - strand at 792.415 kb on - strand at 792.872 kb on - strand, within HSERO_RS03630 at 792.909 kb on + strand, within HSERO_RS03630 at 792.916 kb on - strand, within HSERO_RS03630 at 792.916 kb on - strand, within HSERO_RS03630 at 793.165 kb on - strand, within HSERO_RS03630 at 793.177 kb on - strand, within HSERO_RS03630 at 793.326 kb on - strand, within HSERO_RS03630 at 793.349 kb on - strand, within HSERO_RS03630 at 793.437 kb on + strand at 793.507 kb on + strand at 793.544 kb on - strand at 793.790 kb on - strand, within HSERO_RS03635 at 793.861 kb on + strand, within HSERO_RS03635 at 793.959 kb on - strand, within HSERO_RS03635
Per-strain Table
Position Strand Gene LocusTag Fraction L-mannose (C) remove 791,818 + +0.0 791,823 + +0.4 791,831 - +0.7 791,831 - -0.4 791,939 - HSERO_RS03625 0.21 +1.2 792,016 - HSERO_RS03625 0.33 +0.9 792,159 - HSERO_RS03625 0.57 +0.9 792,218 - HSERO_RS03625 0.66 +1.0 792,251 - HSERO_RS03625 0.72 +0.9 792,337 + HSERO_RS03625 0.86 +0.6 792,403 - +0.4 792,415 - +0.0 792,872 - HSERO_RS03630 0.11 -5.0 792,909 + HSERO_RS03630 0.17 -4.2 792,916 - HSERO_RS03630 0.18 -5.0 792,916 - HSERO_RS03630 0.18 -4.1 793,165 - HSERO_RS03630 0.58 -3.9 793,177 - HSERO_RS03630 0.60 -3.2 793,326 - HSERO_RS03630 0.84 -4.5 793,349 - HSERO_RS03630 0.88 -3.7 793,437 + -0.4 793,507 + +0.8 793,544 - -6.9 793,790 - HSERO_RS03635 0.32 -3.3 793,861 + HSERO_RS03635 0.40 -2.6 793,959 - HSERO_RS03635 0.50 -4.2
Or see this region's nucleotide sequence