Strain Fitness in Sinorhizobium meliloti 1021 around SMc02125

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc02125 and SMc02050 are separated by 175 nucleotides SMc02125: SMc02125 - tRNA-Leu, at 1,668,357 to 1,668,441 SMc02125 SMc02050: SMc02050 - trigger factor, at 1,668,617 to 1,670,092 SMc02050 Position (kb) 1668 1669Strain fitness (log2 ratio) -1 0 1 2at 1667.431 kb on + strandat 1667.431 kb on + strandat 1667.432 kb on - strandat 1667.490 kb on + strandat 1667.900 kb on + strandat 1667.900 kb on + strandat 1667.901 kb on - strandat 1667.901 kb on - strandat 1667.901 kb on - strandat 1667.991 kb on + strandat 1667.991 kb on + strandat 1667.994 kb on - strandat 1668.039 kb on + strandat 1668.153 kb on - strandat 1668.153 kb on - strandat 1668.244 kb on + strandat 1668.244 kb on + strandat 1668.244 kb on + strandat 1668.449 kb on - strandat 1668.449 kb on - strandat 1668.449 kb on - strandat 1668.449 kb on - strandat 1668.449 kb on - strandat 1668.450 kb on + strandat 1668.451 kb on - strandat 1668.451 kb on - strandat 1668.451 kb on - strandat 1668.451 kb on - strandat 1668.614 kb on - strandat 1668.614 kb on - strandat 1669.092 kb on - strand, within SMc02050at 1669.142 kb on + strand, within SMc02050at 1669.143 kb on - strand, within SMc02050at 1669.143 kb on - strand, within SMc02050

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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1,667,431 + -0.0
1,667,431 + -0.6
1,667,432 - +0.7
1,667,490 + -0.1
1,667,900 + +0.8
1,667,900 + +0.3
1,667,901 - -0.2
1,667,901 - -0.3
1,667,901 - +0.4
1,667,991 + -0.3
1,667,991 + +0.3
1,667,994 - -0.8
1,668,039 + -0.6
1,668,153 - -0.4
1,668,153 - +0.4
1,668,244 + +0.5
1,668,244 + +0.8
1,668,244 + +1.3
1,668,449 - +1.9
1,668,449 - -0.7
1,668,449 - +0.4
1,668,449 - +0.0
1,668,449 - +0.4
1,668,450 + +1.4
1,668,451 - +0.2
1,668,451 - +0.8
1,668,451 - +0.6
1,668,451 - +0.9
1,668,614 - -0.4
1,668,614 - +0.3
1,669,092 - SMc02050 0.32 -0.8
1,669,142 + SMc02050 0.36 -1.0
1,669,143 - SMc02050 0.36 -0.9
1,669,143 - SMc02050 0.36 -0.8

Or see this region's nucleotide sequence