Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa5026 and SMa0567 are separated by 153 nucleotides SMa0567 and SMa0570 are separated by 115 nucleotides SMa0570 and SMa0572 are separated by 790 nucleotides
SMa5026: SMa5026 - hypothetical protein, at 300,571 to 301,050
SMa5026
SMa0567: SMa0567 - hypothetical protein, at 301,204 to 301,761
SMa0567
SMa0570: SMa0570 - CyaF4 adenylate cyclase, at 301,877 to 303,766
SMa0570
SMa0572: SMa0572 - hypothetical protein, at 304,557 to 304,880
SMa0572
Position (kb)
301
302
303
304 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 300.906 kb on - strand, within SMa5026 at 300.968 kb on - strand, within SMa5026 at 301.084 kb on - strand at 301.154 kb on + strand at 301.155 kb on - strand at 301.230 kb on + strand at 301.258 kb on + strand at 301.259 kb on - strand at 301.263 kb on - strand, within SMa0567 at 301.280 kb on - strand, within SMa0567 at 301.487 kb on + strand, within SMa0567 at 301.488 kb on - strand, within SMa0567 at 301.496 kb on + strand, within SMa0567 at 301.496 kb on + strand, within SMa0567 at 301.497 kb on - strand, within SMa0567 at 301.497 kb on - strand, within SMa0567 at 301.497 kb on - strand, within SMa0567 at 301.567 kb on - strand, within SMa0567 at 301.840 kb on - strand at 301.843 kb on + strand at 301.844 kb on - strand at 301.859 kb on + strand at 301.862 kb on + strand at 301.862 kb on + strand at 301.863 kb on - strand at 301.972 kb on + strand at 302.205 kb on + strand, within SMa0570 at 302.206 kb on - strand, within SMa0570 at 302.305 kb on + strand, within SMa0570 at 302.320 kb on + strand, within SMa0570 at 302.322 kb on + strand, within SMa0570 at 302.323 kb on - strand, within SMa0570 at 302.323 kb on - strand, within SMa0570 at 302.461 kb on + strand, within SMa0570 at 302.667 kb on + strand, within SMa0570 at 302.667 kb on + strand, within SMa0570 at 302.667 kb on + strand, within SMa0570 at 302.676 kb on + strand, within SMa0570 at 302.676 kb on + strand, within SMa0570 at 302.798 kb on + strand, within SMa0570 at 302.798 kb on + strand, within SMa0570 at 302.798 kb on + strand, within SMa0570 at 302.880 kb on - strand, within SMa0570 at 302.957 kb on + strand, within SMa0570 at 302.958 kb on - strand, within SMa0570 at 302.958 kb on - strand, within SMa0570 at 302.958 kb on - strand, within SMa0570 at 302.973 kb on + strand, within SMa0570 at 303.088 kb on - strand, within SMa0570 at 303.121 kb on + strand, within SMa0570 at 303.186 kb on - strand, within SMa0570 at 303.360 kb on - strand, within SMa0570 at 303.360 kb on - strand, within SMa0570 at 303.436 kb on - strand, within SMa0570 at 303.542 kb on + strand, within SMa0570 at 303.745 kb on + strand at 303.792 kb on + strand at 303.793 kb on - strand at 303.793 kb on - strand at 303.794 kb on + strand at 303.795 kb on - strand at 303.795 kb on - strand at 303.841 kb on + strand at 303.915 kb on + strand at 303.916 kb on - strand at 304.173 kb on - strand at 304.173 kb on - strand at 304.202 kb on + strand at 304.203 kb on - strand at 304.356 kb on + strand at 304.394 kb on - strand at 304.404 kb on + strand at 304.405 kb on - strand at 304.405 kb on - strand at 304.411 kb on + strand at 304.412 kb on - strand at 304.412 kb on - strand at 304.412 kb on - strand at 304.455 kb on - strand at 304.566 kb on - strand at 304.566 kb on - strand at 304.569 kb on - strand at 304.614 kb on + strand, within SMa0572 at 304.617 kb on + strand, within SMa0572 at 304.618 kb on - strand, within SMa0572 at 304.725 kb on + strand, within SMa0572 at 304.725 kb on + strand, within SMa0572 at 304.726 kb on - strand, within SMa0572 at 304.726 kb on - strand, within SMa0572 at 304.747 kb on + strand, within SMa0572 at 304.748 kb on - strand, within SMa0572 at 304.748 kb on - strand, within SMa0572
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 300,906 - SMa5026 0.70 -0.7 300,968 - SMa5026 0.83 +0.3 301,084 - +0.2 301,154 + -0.4 301,155 - +1.3 301,230 + -0.6 301,258 + -0.5 301,259 - -0.1 301,263 - SMa0567 0.11 +0.9 301,280 - SMa0567 0.14 +1.2 301,487 + SMa0567 0.51 +0.2 301,488 - SMa0567 0.51 +1.1 301,496 + SMa0567 0.52 +0.4 301,496 + SMa0567 0.52 -1.2 301,497 - SMa0567 0.53 +0.5 301,497 - SMa0567 0.53 -1.6 301,497 - SMa0567 0.53 -0.1 301,567 - SMa0567 0.65 +0.9 301,840 - -0.0 301,843 + -1.5 301,844 - +0.4 301,859 + -1.2 301,862 + -1.2 301,862 + -0.2 301,863 - +0.5 301,972 + +0.5 302,205 + SMa0570 0.17 +0.1 302,206 - SMa0570 0.17 +0.2 302,305 + SMa0570 0.23 -3.3 302,320 + SMa0570 0.23 -0.1 302,322 + SMa0570 0.24 +0.2 302,323 - SMa0570 0.24 -3.5 302,323 - SMa0570 0.24 +0.7 302,461 + SMa0570 0.31 +1.8 302,667 + SMa0570 0.42 +0.8 302,667 + SMa0570 0.42 +1.5 302,667 + SMa0570 0.42 +1.4 302,676 + SMa0570 0.42 +0.9 302,676 + SMa0570 0.42 -0.5 302,798 + SMa0570 0.49 +1.4 302,798 + SMa0570 0.49 +1.1 302,798 + SMa0570 0.49 -0.0 302,880 - SMa0570 0.53 +0.4 302,957 + SMa0570 0.57 +0.5 302,958 - SMa0570 0.57 +0.2 302,958 - SMa0570 0.57 +0.5 302,958 - SMa0570 0.57 +0.0 302,973 + SMa0570 0.58 -3.9 303,088 - SMa0570 0.64 -0.4 303,121 + SMa0570 0.66 +0.3 303,186 - SMa0570 0.69 +0.7 303,360 - SMa0570 0.78 -0.3 303,360 - SMa0570 0.78 -0.3 303,436 - SMa0570 0.82 +0.1 303,542 + SMa0570 0.88 +0.7 303,745 + -0.5 303,792 + +1.1 303,793 - +2.8 303,793 - +2.2 303,794 + +0.7 303,795 - -2.6 303,795 - -1.9 303,841 + -0.8 303,915 + -1.0 303,916 - -0.2 304,173 - -0.1 304,173 - +2.9 304,202 + -0.5 304,203 - -0.4 304,356 + +1.2 304,394 - +0.4 304,404 + -0.4 304,405 - -1.3 304,405 - -0.2 304,411 + -0.9 304,412 - -2.0 304,412 - +0.5 304,412 - -0.0 304,455 - +0.2 304,566 - +0.3 304,566 - -0.1 304,569 - +0.4 304,614 + SMa0572 0.18 +0.0 304,617 + SMa0572 0.19 +2.2 304,618 - SMa0572 0.19 -1.2 304,725 + SMa0572 0.52 +0.8 304,725 + SMa0572 0.52 +0.6 304,726 - SMa0572 0.52 -1.1 304,726 - SMa0572 0.52 +0.1 304,747 + SMa0572 0.59 -0.6 304,748 - SMa0572 0.59 +0.3 304,748 - SMa0572 0.59 +0.1
Or see this region's nucleotide sequence