Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21113 and SM_b21114 are separated by 44 nucleotides SM_b21114 and SM_b21115 are separated by 25 nucleotides SM_b21115 and SM_b21116 are separated by 213 nucleotides
SM_b21113: SM_b21113 - hypothetical protein, at 753,945 to 755,222
_b21113
SM_b21114: SM_b21114 - nitrate transport protein, at 755,267 to 756,592
_b21114
SM_b21115: SM_b21115 - response regulator protein, at 756,618 to 757,106
_b21115
SM_b21116: SM_b21116 - trifolitoxin biosynthesis protein, at 757,320 to 758,051
_b21116
Position (kb) 755
756
757 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 754.289 kb on - strand, within SM_b21113 at 754.395 kb on + strand, within SM_b21113 at 754.395 kb on + strand, within SM_b21113 at 754.396 kb on - strand, within SM_b21113 at 754.503 kb on + strand, within SM_b21113 at 754.503 kb on + strand, within SM_b21113 at 754.503 kb on + strand, within SM_b21113 at 754.504 kb on - strand, within SM_b21113 at 754.671 kb on + strand, within SM_b21113 at 754.672 kb on - strand, within SM_b21113 at 755.019 kb on + strand, within SM_b21113 at 755.046 kb on + strand, within SM_b21113 at 755.046 kb on + strand, within SM_b21113 at 755.047 kb on - strand, within SM_b21113 at 755.089 kb on - strand, within SM_b21113 at 755.145 kb on + strand at 755.145 kb on + strand at 755.146 kb on - strand at 755.146 kb on - strand at 755.206 kb on - strand at 755.329 kb on + strand at 755.329 kb on + strand at 755.329 kb on + strand at 755.329 kb on + strand at 755.329 kb on + strand at 755.329 kb on + strand at 755.330 kb on - strand at 755.330 kb on - strand at 755.330 kb on - strand at 755.331 kb on + strand at 755.331 kb on + strand at 755.331 kb on + strand at 755.332 kb on - strand at 755.332 kb on - strand at 755.332 kb on - strand at 755.332 kb on - strand at 755.455 kb on - strand, within SM_b21114 at 755.538 kb on + strand, within SM_b21114 at 755.538 kb on + strand, within SM_b21114 at 755.539 kb on - strand, within SM_b21114 at 755.539 kb on - strand, within SM_b21114 at 755.569 kb on - strand, within SM_b21114 at 755.598 kb on + strand, within SM_b21114 at 755.599 kb on - strand, within SM_b21114 at 755.599 kb on - strand, within SM_b21114 at 755.599 kb on - strand, within SM_b21114 at 755.599 kb on - strand, within SM_b21114 at 755.599 kb on - strand, within SM_b21114 at 755.794 kb on + strand, within SM_b21114 at 756.045 kb on + strand, within SM_b21114 at 756.046 kb on - strand, within SM_b21114 at 756.050 kb on - strand, within SM_b21114 at 756.195 kb on + strand, within SM_b21114 at 756.196 kb on - strand, within SM_b21114 at 756.196 kb on - strand, within SM_b21114 at 756.569 kb on + strand at 756.569 kb on + strand at 756.569 kb on + strand at 756.569 kb on + strand at 756.753 kb on - strand, within SM_b21115 at 757.041 kb on + strand, within SM_b21115 at 757.041 kb on + strand, within SM_b21115 at 757.151 kb on + strand at 757.151 kb on + strand at 757.152 kb on - strand at 757.214 kb on - strand at 757.567 kb on + strand, within SM_b21116 at 757.567 kb on + strand, within SM_b21116 at 757.567 kb on + strand, within SM_b21116
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 754,289 - SM_b21113 0.27 -0.8 754,395 + SM_b21113 0.35 -1.0 754,395 + SM_b21113 0.35 +0.5 754,396 - SM_b21113 0.35 -1.0 754,503 + SM_b21113 0.44 -1.2 754,503 + SM_b21113 0.44 +1.4 754,503 + SM_b21113 0.44 +0.1 754,504 - SM_b21113 0.44 -0.6 754,671 + SM_b21113 0.57 +1.8 754,672 - SM_b21113 0.57 -0.3 755,019 + SM_b21113 0.84 -0.1 755,046 + SM_b21113 0.86 -0.3 755,046 + SM_b21113 0.86 -1.4 755,047 - SM_b21113 0.86 -0.9 755,089 - SM_b21113 0.90 +0.1 755,145 + +0.8 755,145 + -4.0 755,146 - -0.7 755,146 - -0.4 755,206 - -1.0 755,329 + -0.6 755,329 + -2.0 755,329 + -0.0 755,329 + +0.2 755,329 + -0.6 755,329 + +1.1 755,330 - +0.5 755,330 - -1.7 755,330 - +0.0 755,331 + -0.7 755,331 + -0.6 755,331 + -0.6 755,332 - +0.8 755,332 - -1.1 755,332 - -0.3 755,332 - -2.8 755,455 - SM_b21114 0.14 +0.1 755,538 + SM_b21114 0.20 +0.4 755,538 + SM_b21114 0.20 -0.3 755,539 - SM_b21114 0.21 -0.2 755,539 - SM_b21114 0.21 +0.2 755,569 - SM_b21114 0.23 -1.2 755,598 + SM_b21114 0.25 -1.5 755,599 - SM_b21114 0.25 -4.0 755,599 - SM_b21114 0.25 -0.0 755,599 - SM_b21114 0.25 -0.2 755,599 - SM_b21114 0.25 -0.9 755,599 - SM_b21114 0.25 -0.8 755,794 + SM_b21114 0.40 +1.2 756,045 + SM_b21114 0.59 +0.5 756,046 - SM_b21114 0.59 -0.2 756,050 - SM_b21114 0.59 -0.2 756,195 + SM_b21114 0.70 -1.0 756,196 - SM_b21114 0.70 -0.1 756,196 - SM_b21114 0.70 -0.5 756,569 + +1.0 756,569 + +1.3 756,569 + +0.5 756,569 + -0.7 756,753 - SM_b21115 0.28 -0.2 757,041 + SM_b21115 0.87 -0.1 757,041 + SM_b21115 0.87 +0.8 757,151 + +0.1 757,151 + +0.4 757,152 - +0.1 757,214 - -1.0 757,567 + SM_b21116 0.34 -1.4 757,567 + SM_b21116 0.34 -1.5 757,567 + SM_b21116 0.34 -0.2
Or see this region's nucleotide sequence